RNA–Protein interactions for RNA: ENST00000444278.2

DEF6-202, Transcript of DEF6, guanine nucleotide exchange factor, humanhuman

TSL 3

Gene DEF6, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF6-202ENST00000444278 RBM27Q9P2N5 1060 aaKnown RBP18■□□□□ 0.47
DEF6-202ENST00000444278 TRPM7Q96QT4 1865 aa18■□□□□ 0.47
DEF6-202ENST00000444278 NID2Q14112 1375 aa18■□□□□ 0.47
DEF6-202ENST00000444278 FOXN1O15353 648 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 PDHBP11177 359 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 BMP3P12645 472 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 PDIA4P13667 645 aaKnown RBP17.99■□□□□ 0.47
DEF6-202ENST00000444278 ECE1P42892 770 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 VEGFBP49765 207 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 BACE1P56817 501 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 ZYXQ15942 572 aaKnown RBP17.99■□□□□ 0.47
DEF6-202ENST00000444278 LDLRAD1Q5T700 205 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 GMCL1Q96IK5 515 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 SNCAIPQ9Y6H5 919 aa17.99■□□□□ 0.47
DEF6-202ENST00000444278 A0A1W2PRG0 241 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 PALM3A6NDB9 673 aaPredicted RBP17.98■□□□□ 0.47
DEF6-202ENST00000444278 KLRF2D3W0D1 207 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 NDUFB10O96000 172 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 IFNAR1P17181 557 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 PDCP20941 246 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 SMARCA1P28370 1054 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 CDC27P30260 824 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 MOB2Q70IA6 237 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 CHURC1Q8WUH1 139 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 GPCPD1Q9NPB8 672 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 MAD2L2Q9UI95 211 aa17.98■□□□□ 0.47
DEF6-202ENST00000444278 SPDYE5A6NIY4 337 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 TRIM75PA6NK02 468 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 CXCL11O14625 94 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 SNHG28P0DPA3 235 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 CTCFP49711 727 aaPredicted RBP17.97■□□□□ 0.47
DEF6-202ENST00000444278 FMR1Q06787 632 aaKnown RBP eCLIP17.97■□□□□ 0.47
DEF6-202ENST00000444278 ZNF543Q08ER8 600 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 PPIL2Q13356 520 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 TMTC3Q6ZXV5 915 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 CCDC84Q86UT8 332 aaPredicted RBP17.97■□□□□ 0.47
DEF6-202ENST00000444278 CCDC82Q8N4S0 544 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 SLC26A6Q9BXS9 759 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.97■□□□□ 0.47
DEF6-202ENST00000444278 AFG3L2Q9Y4W6 797 aa17.97■□□□□ 0.47
DEF6-202ENST00000444278 FRMPD2Q68DX3 1309 aaPredicted RBP17.97■□□□□ 0.47
DEF6-202ENST00000444278 PTPDC1A2A3K4 754 aa17.96■□□□□ 0.47
DEF6-202ENST00000444278 WDR46O15213 610 aaKnown RBP17.96■□□□□ 0.47
DEF6-202ENST00000444278 XBP1P17861 261 aa17.96■□□□□ 0.47
DEF6-202ENST00000444278 GJB2P29033 226 aa17.96■□□□□ 0.47
DEF6-202ENST00000444278 MTMR2Q13614 643 aa17.96■□□□□ 0.47
DEF6-202ENST00000444278 DEFB115Q30KQ5 88 aa17.96■□□□□ 0.47
DEF6-202ENST00000444278 SPICE1Q8N0Z3 855 aa17.96■□□□□ 0.47
DEF6-202ENST00000444278 NSUN7Q8NE18 718 aaKnown RBP17.96■□□□□ 0.47
DEF6-202ENST00000444278 OPTNQ96CV9 577 aa17.96■□□□□ 0.47
DEF6-202ENST00000444278 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
DEF6-202ENST00000444278 OTUD5Q96G74 571 aa17.96■□□□□ 0.47
DEF6-202ENST00000444278 RNF26Q9BY78 433 aaPredicted RBP17.96■□□□□ 0.47
DEF6-202ENST00000444278 FAM217BQ9NTX9 383 aaPredicted RBP17.96■□□□□ 0.47
DEF6-202ENST00000444278 ORC3Q9UBD5 711 aaPredicted RBP17.96■□□□□ 0.47
DEF6-202ENST00000444278 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
DEF6-202ENST00000444278 PRPF3O43395 683 aaKnown RBP17.95■□□□□ 0.46
DEF6-202ENST00000444278 FMNL1O95466 1100 aaPredicted RBP17.95■□□□□ 0.46
DEF6-202ENST00000444278 GOLGA8HP0CJ92 632 aa17.95■□□□□ 0.46
DEF6-202ENST00000444278 HUNKP57058 714 aa17.95■□□□□ 0.46
DEF6-202ENST00000444278 KCTD1Q719H9 257 aa17.95■□□□□ 0.46
DEF6-202ENST00000444278 FAM160B2Q86V87 743 aa17.95■□□□□ 0.46
DEF6-202ENST00000444278 STAG2Q8N3U4 1231 aa17.95■□□□□ 0.46
DEF6-202ENST00000444278 SMARCC2Q8TAQ2 1214 aa17.95■□□□□ 0.46
DEF6-202ENST00000444278 RRP36Q96EU6 259 aaKnown RBP17.95■□□□□ 0.46
DEF6-202ENST00000444278 CLMNQ96JQ2 1002 aa17.95■□□□□ 0.46
DEF6-202ENST00000444278 FEM1BQ9UK73 627 aa17.95■□□□□ 0.46
DEF6-202ENST00000444278 CTDP1Q9Y5B0 961 aaPredicted RBP17.95■□□□□ 0.46
DEF6-202ENST00000444278 OTOFQ9HC10 1997 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 RASSF10A6NK89 507 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 TMEM232C9JQI7 657 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 PLEKHA8P1O95397 391 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 DEXIO95424 95 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 STAT2P52630 851 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 TRIM29Q14134 588 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 FAM83BQ5T0W9 1011 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 CST9Q5W186 159 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 FASTKD5Q7L8L6 764 aaKnown RBP17.94■□□□□ 0.46
DEF6-202ENST00000444278 SRBD1Q8N5C6 995 aaKnown RBP17.94■□□□□ 0.46
DEF6-202ENST00000444278 SPZ1Q9BXG8 430 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 VAT1LQ9HCJ6 419 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 WBP1LQ9NX94 342 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 STK36Q9NRP7 1315 aa17.94■□□□□ 0.46
DEF6-202ENST00000444278 PLA2G6O60733 806 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 HMGCS2P54868 508 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 ST3GAL1Q11201 340 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 TRAF1Q13077 416 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 PABPC4Q13310 644 aaKnown RBP eCLIP17.93■□□□□ 0.46
DEF6-202ENST00000444278 SNAPC2Q13487 334 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 NTRK3Q16288 839 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 SH3D19Q5HYK7 790 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 LARP1BQ659C4 914 aaKnown RBP17.93■□□□□ 0.46
DEF6-202ENST00000444278 GADL1Q6ZQY3 521 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 PHKBQ93100 1093 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 C12orf42Q96LP6 360 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 TANGO6Q9C0B7 1094 aa17.93■□□□□ 0.46
DEF6-202ENST00000444278 V9GY48 417 aaPredicted RBP17.93■□□□□ 0.46
DEF6-202ENST00000444278 MYH6P13533 1939 aa17.92■□□□□ 0.46
DEF6-202ENST00000444278 H3BQV1 296 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms