RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 LHX8Q68G74 356 aa16.69■□□□□ 0.26
TREX1-202ENST00000444177 MB21D1Q8N884 522 aa16.69■□□□□ 0.26
TREX1-202ENST00000444177 FAM227BQ96M60 508 aa16.69■□□□□ 0.26
TREX1-202ENST00000444177 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.69■□□□□ 0.26
TREX1-202ENST00000444177 MKNK2Q9HBH9 465 aa16.69■□□□□ 0.26
TREX1-202ENST00000444177 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
TREX1-202ENST00000444177 WDR46O15213 610 aaKnown RBP16.68■□□□□ 0.26
TREX1-202ENST00000444177 STRNO43815 780 aa16.68■□□□□ 0.26
TREX1-202ENST00000444177 ERCC3P19447 782 aa16.68■□□□□ 0.26
TREX1-202ENST00000444177 NMIQ13287 307 aaPredicted RBP16.68■□□□□ 0.26
TREX1-202ENST00000444177 SHCBP1Q8NEM2 672 aa16.68■□□□□ 0.26
TREX1-202ENST00000444177 NPLOC4Q8TAT6 608 aa16.68■□□□□ 0.26
TREX1-202ENST00000444177 ATG4CQ96DT6 458 aa16.68■□□□□ 0.26
TREX1-202ENST00000444177 C11orf49Q9H6J7 331 aa16.68■□□□□ 0.26
TREX1-202ENST00000444177 RBM27Q9P2N5 1060 aaKnown RBP16.68■□□□□ 0.26
TREX1-202ENST00000444177 NEFLP07196 543 aa16.67■□□□□ 0.26
TREX1-202ENST00000444177 RASA1P20936 1047 aa16.67■□□□□ 0.26
TREX1-202ENST00000444177 PDE4AP27815 886 aa16.67■□□□□ 0.26
TREX1-202ENST00000444177 PLS1Q14651 629 aa16.67■□□□□ 0.26
TREX1-202ENST00000444177 VPS53Q5VIR6 699 aa16.67■□□□□ 0.26
TREX1-202ENST00000444177 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
TREX1-202ENST00000444177 DPP9Q86TI2 863 aa16.67■□□□□ 0.26
TREX1-202ENST00000444177 MROH8Q9H579 483 aa16.67■□□□□ 0.26
TREX1-202ENST00000444177 ZNF287Q9HBT7 754 aa16.67■□□□□ 0.26
TREX1-202ENST00000444177 RLFQ13129 1914 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 PRDM1O75626 825 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 IGHA2P01877 340 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 ADORA2AP29274 412 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 CYP2C19P33261 490 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 PPARAQ07869 468 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 MCMDC2Q4G0Z9 681 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 PRO3102Q9H379 93 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 GOPCQ9HD26 462 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 ADAMTS5Q9UNA0 930 aa16.66■□□□□ 0.26
TREX1-202ENST00000444177 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
TREX1-202ENST00000444177 FOXP2O15409 715 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 RAD21O60216 631 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 COBLO75128 1261 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
TREX1-202ENST00000444177 SDSP20132 328 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 TMEM132BQ14DG7 1078 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 ZNF589Q86UQ0 364 aaPredicted RBP16.65■□□□□ 0.26
TREX1-202ENST00000444177 NCAPG2Q86XI2 1143 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 DIAPH3Q9NSV4 1193 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 FBXO28Q9NVF7 368 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 NYAP2Q9P242 653 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
TREX1-202ENST00000444177 COL6A1P12109 1028 aa16.64■□□□□ 0.25
TREX1-202ENST00000444177 CNGA1P29973 690 aa16.64■□□□□ 0.25
TREX1-202ENST00000444177 PDE4BQ07343 736 aa16.64■□□□□ 0.25
TREX1-202ENST00000444177 FAM83BQ5T0W9 1011 aa16.64■□□□□ 0.25
TREX1-202ENST00000444177 ERICH6BQ5W0A0 696 aa16.64■□□□□ 0.25
TREX1-202ENST00000444177 OLFML2BQ68BL8 750 aa16.64■□□□□ 0.25
TREX1-202ENST00000444177 C7orf61Q8IZ16 206 aa16.64■□□□□ 0.25
TREX1-202ENST00000444177 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
TREX1-202ENST00000444177 ABRAQ8N0Z2 381 aa16.64■□□□□ 0.25
TREX1-202ENST00000444177 TRPV1Q8NER1 839 aa16.64■□□□□ 0.25
TREX1-202ENST00000444177 F5H6K3 240 aa16.63■□□□□ 0.25
TREX1-202ENST00000444177 VWA5AO00534 786 aa16.63■□□□□ 0.25
TREX1-202ENST00000444177 SLC25A27O95847 323 aa16.63■□□□□ 0.25
TREX1-202ENST00000444177 KLRC3Q07444 240 aa16.63■□□□□ 0.25
TREX1-202ENST00000444177 TTC22Q5TAA0 569 aa16.63■□□□□ 0.25
TREX1-202ENST00000444177 SLC5A4Q9NY91 659 aa16.63■□□□□ 0.25
TREX1-202ENST00000444177 CLIP2Q9UDT6 1046 aa16.63■□□□□ 0.25
TREX1-202ENST00000444177 DDX20Q9UHI6 824 aaKnown RBP16.63■□□□□ 0.25
TREX1-202ENST00000444177 PPP1R9AQ9ULJ8 1098 aa16.63■□□□□ 0.25
TREX1-202ENST00000444177 PFASO15067 1338 aa16.63■□□□□ 0.25
TREX1-202ENST00000444177 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
TREX1-202ENST00000444177 HIP1O00291 1037 aa16.62■□□□□ 0.25
TREX1-202ENST00000444177 MSCO60682 206 aa16.62■□□□□ 0.25
TREX1-202ENST00000444177 TSPY3P0CV98 308 aa16.62■□□□□ 0.25
TREX1-202ENST00000444177 TSPY8P0CW00 308 aa16.62■□□□□ 0.25
TREX1-202ENST00000444177 FCER1AP12319 257 aa16.62■□□□□ 0.25
TREX1-202ENST00000444177 GSPT1P15170 499 aaKnown RBP16.62■□□□□ 0.25
TREX1-202ENST00000444177 STAT3P40763 770 aa16.62■□□□□ 0.25
TREX1-202ENST00000444177 MFAP1P55081 439 aaKnown RBP16.62■□□□□ 0.25
TREX1-202ENST00000444177 CTDSPL2Q05D32 466 aa16.62■□□□□ 0.25
TREX1-202ENST00000444177 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
TREX1-202ENST00000444177 NUP88Q99567 741 aaPredicted RBP16.62■□□□□ 0.25
TREX1-202ENST00000444177 ZMYND8Q9ULU4 1186 aaPredicted RBP16.62■□□□□ 0.25
TREX1-202ENST00000444177 ALPK3Q96L96 1907 aa16.61■□□□□ 0.25
TREX1-202ENST00000444177 HSPD1P10809 573 aaKnown RBP16.61■□□□□ 0.25
TREX1-202ENST00000444177 CYBAP13498 195 aa16.61■□□□□ 0.25
TREX1-202ENST00000444177 RIOX2Q8IUF8 465 aa16.61■□□□□ 0.25
TREX1-202ENST00000444177 REPS2Q8NFH8 660 aa16.61■□□□□ 0.25
TREX1-202ENST00000444177 MKL1Q969V6 931 aa16.61■□□□□ 0.25
TREX1-202ENST00000444177 A0A0G2JMZ2 1700 aa16.61■□□□□ 0.25
TREX1-202ENST00000444177 PLIN4Q96Q06 1357 aa16.61■□□□□ 0.25
TREX1-202ENST00000444177 NDUFB10O96000 172 aa16.6■□□□□ 0.25
TREX1-202ENST00000444177 FAM47AQ5JRC9 791 aa16.6■□□□□ 0.25
TREX1-202ENST00000444177 NEDD1Q8NHV4 660 aa16.6■□□□□ 0.25
TREX1-202ENST00000444177 CEP95Q96GE4 821 aa16.6■□□□□ 0.25
TREX1-202ENST00000444177 MAML3Q96JK9 1138 aa16.6■□□□□ 0.25
TREX1-202ENST00000444177 SLF1Q9BQI6 1058 aa16.6■□□□□ 0.25
TREX1-202ENST00000444177 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
TREX1-202ENST00000444177 ZNF214Q9UL59 606 aaPredicted RBP16.6■□□□□ 0.25
TREX1-202ENST00000444177 ZMYM6O95789 1325 aa16.6■□□□□ 0.25
TREX1-202ENST00000444177 SZT2Q5T011 3432 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 MYH4Q9Y623 1939 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms