RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 ZSCAN25Q6NSZ9 544 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 ABRAQ8N0Z2 381 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 HAUS7Q99871 368 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 MTMR10Q9NXD2 777 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 STXBP5LQ9Y2K9 1186 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 SLC4A4Q9Y6R1 1079 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 EEF2P13639 858 aaKnown RBP12.08□□□□□ -0.48
HDLBP-221ENST00000444092 UBE3CQ15386 1083 aa12.08□□□□□ -0.48
HDLBP-221ENST00000444092 SLC39A5Q6ZMH5 540 aa12.08□□□□□ -0.48
HDLBP-221ENST00000444092 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
HDLBP-221ENST00000444092 SIAH1Q8IUQ4 282 aa12.08□□□□□ -0.48
HDLBP-221ENST00000444092 MAML3Q96JK9 1138 aa12.08□□□□□ -0.48
HDLBP-221ENST00000444092 LRRCC1Q9C099 1032 aa12.08□□□□□ -0.48
HDLBP-221ENST00000444092 KANSL2Q9H9L4 492 aa12.08□□□□□ -0.48
HDLBP-221ENST00000444092 GOPCQ9HD26 462 aa12.08□□□□□ -0.48
HDLBP-221ENST00000444092 PRDM5Q9NQX1 630 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-221ENST00000444092 SMIM22K7EJ46 135 aa12.07□□□□□ -0.48
HDLBP-221ENST00000444092 IGHA2P01877 340 aa12.07□□□□□ -0.48
HDLBP-221ENST00000444092 CHGBP05060 677 aa12.07□□□□□ -0.48
HDLBP-221ENST00000444092 KCTD2Q14681 263 aa12.07□□□□□ -0.48
HDLBP-221ENST00000444092 TMEM132BQ14DG7 1078 aa12.07□□□□□ -0.48
HDLBP-221ENST00000444092 MMP19Q99542 508 aa12.07□□□□□ -0.48
HDLBP-221ENST00000444092 RARBP10826 455 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 STAT3P40763 770 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 ADCYAP1R1P41586 468 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 LRRC41Q15345 812 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 CTR9Q6PD62 1173 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 RIOX2Q8IUF8 465 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 STK11IPQ8N1F8 1099 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 FERMT2Q96AC1 680 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 PUS7LQ9H0K6 701 aaKnown RBP12.06□□□□□ -0.48
HDLBP-221ENST00000444092 MKNK2Q9HBH9 465 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 FBXO28Q9NVF7 368 aa12.06□□□□□ -0.48
HDLBP-221ENST00000444092 ARPP21Q9UBL0 812 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-221ENST00000444092 GREB1LQ9C091 1923 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-221ENST00000444092 SMARCA5O60264 1052 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-221ENST00000444092 PGK2P07205 417 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 COPB2P35606 906 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 TRIM60Q495X7 471 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 FAM83BQ5T0W9 1011 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 FAM161BQ96MY7 647 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 TINF2Q9BSI4 451 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 XPNPEP3Q9NQH7 507 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 NRBP1Q9UHY1 535 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 RCAN3Q9UKA8 241 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 PPP1R9AQ9ULJ8 1098 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 ADAMTS5Q9UNA0 930 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 MCM3APO60318 1980 aa12.05□□□□□ -0.48
HDLBP-221ENST00000444092 MINDY4BA8MYZ0 360 aa12.04□□□□□ -0.48
HDLBP-221ENST00000444092 VWA5AO00534 786 aa12.04□□□□□ -0.48
HDLBP-221ENST00000444092 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
HDLBP-221ENST00000444092 ZNF697Q5TEC3 545 aa12.04□□□□□ -0.48
HDLBP-221ENST00000444092 FAM109BQ6ICB4 259 aaPredicted RBP12.04□□□□□ -0.48
HDLBP-221ENST00000444092 RNF180Q86T96 592 aa12.04□□□□□ -0.48
HDLBP-221ENST00000444092 BADQ92934 168 aa12.04□□□□□ -0.48
HDLBP-221ENST00000444092 ECHDC1Q9NTX5 307 aa12.04□□□□□ -0.48
HDLBP-221ENST00000444092 DIS3Q9Y2L1 958 aaKnown RBP12.04□□□□□ -0.48
HDLBP-221ENST00000444092 CTDP1Q9Y5B0 961 aaPredicted RBP12.04□□□□□ -0.48
HDLBP-221ENST00000444092 CUL9Q8IWT3 2517 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 PGK1P00558 417 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 SNX17Q15036 470 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 SHHQ15465 462 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 ZNF792Q3KQV3 632 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 SBK1Q52WX2 424 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 GPATCH3Q96I76 525 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 STRBPQ96SI9 672 aaKnown RBP12.03□□□□□ -0.48
HDLBP-221ENST00000444092 SLF1Q9BQI6 1058 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 ZNF214Q9UL59 606 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-221ENST00000444092 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
HDLBP-221ENST00000444092 A0A0C4DFX4 3053 aa12.02□□□□□ -0.48
HDLBP-221ENST00000444092 F5H6K3 240 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 APPP05067 770 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 AKR1A1P14550 325 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 TLE2Q04725 743 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 KLRC3Q07444 240 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 C1orf53Q5VUE5 145 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 SNRNP48Q6IEG0 339 aaKnown RBP12.02□□□□□ -0.49
HDLBP-221ENST00000444092 GIMAP6Q6P9H5 292 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 ZNF444Q8N0Y2 327 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-221ENST00000444092 KBTBD3Q8NAB2 608 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 APPBP2Q92624 585 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 NUP88Q99567 741 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-221ENST00000444092 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 ZNF287Q9HBT7 754 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 PDLIM7Q9NR12 457 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 NYAP2Q9P242 653 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 PHF24Q9UPV7 400 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 TACC3Q9Y6A5 838 aa12.02□□□□□ -0.49
HDLBP-221ENST00000444092 LAMA2P24043 3122 aaKnown RBP12.02□□□□□ -0.49
HDLBP-221ENST00000444092 GSG1L2A8MUP6 293 aa12.01□□□□□ -0.49
HDLBP-221ENST00000444092 ZBED4O75132 1171 aa12.01□□□□□ -0.49
HDLBP-221ENST00000444092 CLTBP09497 229 aa12.01□□□□□ -0.49
HDLBP-221ENST00000444092 ZNF865P0CJ78 1059 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-221ENST00000444092 TAL1P17542 331 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-221ENST00000444092 RASA1P20936 1047 aa12.01□□□□□ -0.49
HDLBP-221ENST00000444092 TDO2P48775 406 aa12.01□□□□□ -0.49
HDLBP-221ENST00000444092 C9orf50Q5SZB4 431 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms