RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 SNHG28P0DPA3 235 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 GCLCP48506 637 aaPredicted RBP15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 ADCK5Q3MIX3 580 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 ANKS1AQ92625 1134 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 ERO1AQ96HE7 468 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 GMCL1Q96IK5 515 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 TANGO6Q9C0B7 1094 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 GOPCQ9HD26 462 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 GABRQQ9UN88 632 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 CENPFP49454 3210 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 TNKSO95271 1327 aa15.16■□□□□ 0.02
PDLIM2-212ENST00000443561 PLXNA1Q9UIW2 1896 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 PSMC4P43686 418 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 ERVK-9P63128 1117 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 ERVK-24P63145 666 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 SLC35G1Q2M3R5 365 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 SLFN13Q68D06 897 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 CHST3Q7LGC8 479 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 ZSCAN10Q96SZ4 725 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 PAGR1Q9BTK6 254 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 PPP1R9AQ9ULJ8 1098 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 TRIM17Q9Y577 477 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 RBBP6Q7Z6E9 1792 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 MYPNQ86TC9 1320 aa15.15■□□□□ 0.02
PDLIM2-212ENST00000443561 FLOT1O75955 427 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 PDHBP11177 359 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 TOP1P11387 765 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 TAL1P17542 331 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 MCCP23508 829 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 COG2Q14746 738 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 TMEM132BQ14DG7 1078 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 TTBK2Q6IQ55 1244 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 KIAA1211Q6ZU35 1233 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 KCTD1Q719H9 257 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 KRT23Q9C075 422 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 CNNM2Q9H8M5 875 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 EFCC1Q9HA90 598 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 ZNF214Q9UL59 606 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 RABGAP1Q9Y3P9 1069 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 PTCH2Q9Y6C5 1203 aa15.14■□□□□ 0.01
PDLIM2-212ENST00000443561 MYH6P13533 1939 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 VWA5AO00534 786 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 RAD21O60216 631 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 SLC34A2O95436 690 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 SEC24BO95487 1268 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 HSPA4P34932 840 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 PRKCZQ05513 592 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 TSGA10IPQ3SY00 556 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 DGKHQ86XP1 1220 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 IGDCC4Q8TDY8 1250 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 GJD2Q9UKL4 321 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 PTPN22Q9Y2R2 807 aa15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 FRMPD2Q68DX3 1309 aaPredicted RBP15.13■□□□□ 0.01
PDLIM2-212ENST00000443561 BMP3P12645 472 aa15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 NCOA7Q8NI08 942 aa15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 USP6NLQ92738 828 aa15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 TTC14Q96N46 770 aa15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 MOV10L1Q9BXT6 1211 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 CPVLQ9H3G5 476 aa15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 SRRDQ9UH36 339 aa15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 MTMR7Q9Y216 660 aa15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 SNX14Q9Y5W7 946 aa15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 ZNF536O15090 1300 aa15.12■□□□□ 0.01
PDLIM2-212ENST00000443561 BAZ2BQ9UIF8 2168 aaKnown RBP15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 TMEM232C9JQI7 657 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 CPA1P15085 419 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 NT5C2P49902 561 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 SNAP25P60880 206 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 C8orf34Q49A92 452 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 FBXO46Q6PJ61 603 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 BTNL9Q6UXG8 535 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 PNMA1Q8ND90 353 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 GPRC5AQ8NFJ5 357 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 GTF3C2Q8WUA4 911 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 SLF1Q9BQI6 1058 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 USP26Q9BXU7 913 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 SPATC1LQ9H0A9 340 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 LY9Q9HBG7 655 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 HPS5Q9UPZ3 1129 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 RIPK3Q9Y572 518 aa15.11■□□□□ 0.01
PDLIM2-212ENST00000443561 FRMPD3Q5JV73 1810 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 LRRC37A2A6NM11 1700 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 SH2B2O14492 632 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 PLA2G6O60733 806 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 SLC16A2P36021 539 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 SLC1A4P43007 532 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 EXOSC10Q01780 885 aaKnown RBP15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 MORN1Q5T089 497 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 CASC1Q6TDU7 716 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 GPR142Q7Z601 462 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 DCAF4Q8WV16 495 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 ABHD8Q96I13 439 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 TCEANC2Q96MN5 208 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 LRRC2Q9BYS8 371 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 SLC38A10Q9HBR0 1119 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 HOXC10Q9NYD6 342 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 FEM1BQ9UK73 627 aa15.1■□□□□ 0.01
PDLIM2-212ENST00000443561 BRCA2P51587 3418 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms