RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 AOX1Q06278 1338 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 ANKRD31Q8N7Z5 1873 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 PNMA6FA0A0J9YX94 578 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 POLRMTO00411 1230 aaKnown RBP8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 IGHA2P01877 340 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 TBC1D8BQ0IIM8 1120 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 OS9Q13438 667 aaPredicted RBP8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 COL19A1Q14993 1142 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 DEFB132Q7Z7B7 95 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 AMIGO3Q86WK7 504 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 CLASRPQ8N2M8 674 aaKnown RBP8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 IRF7Q92985 503 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 GPATCH3Q96I76 525 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 EFCC1Q9HA90 598 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 GPR108Q9NPR9 543 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 ABCC12Q96J65 1359 aa8.71□□□□□ -1.02
R3HDM1-210ENST00000443537 TNRC6CQ9HCJ0 1690 aaKnown RBP8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 PHF20L1A8MW92 1017 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 EIF1AYO14602 144 aaKnown RBP8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 MMP20O60882 483 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 CPNE3O75131 537 aaKnown RBP8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 SERPINB2P05120 415 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 LDHBP07195 334 aaKnown RBP8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 PSAPP07602 524 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 CES1P23141 567 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 PDE6BP35913 854 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 IGHMBP2P38935 993 aaKnown RBP8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 RFX5P48382 616 aaPredicted RBP8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 PTPN12Q05209 780 aaKnown RBP8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 GAS6Q14393 721 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 CRY2Q49AN0 593 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 CSRNP1Q96S65 589 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 BRIP1Q9BX63 1249 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 ZFATQ9P243 1243 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 AKAP2Q9Y2D5 859 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 MROH5Q6ZUA9 1318 aa8.7□□□□□ -1.02
R3HDM1-210ENST00000443537 LRRC37AA6NMS7 1700 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 KLRG2A4D1S0 409 aaPredicted RBP8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 EYA2O00167 538 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 C2CD2LO14523 706 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 MMP10P09238 476 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 EPHA10Q5JZY3 1008 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 ANKRD45Q5TZF3 282 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 PRR5LQ6MZQ0 368 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 DDX46Q7L014 1031 aaKnown RBP8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 SYT9Q86SS6 491 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 TICAM2Q86XR7 235 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 C1orf127Q8N9H9 656 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 PMEPA1Q969W9 287 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 MPHOSPH8Q99549 860 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 MTFR1LQ9H019 292 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 BCL11AQ9H165 835 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 CNTN3Q9P232 1028 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 EXOC6BQ9Y2D4 811 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 TTC41PQ6P2S7 1318 aa8.69□□□□□ -1.02
R3HDM1-210ENST00000443537 MYH13Q9UKX3 1938 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 ERC2O15083 957 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 VSIG8P0DPA2 414 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 POLD1P28340 1107 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 HOXA10P31260 410 aaPredicted RBP8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 RBM25P49756 843 aaKnown RBP8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 PCBP4P57723 403 aaKnown RBP8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 FGD1P98174 961 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 ENOX2Q16206 610 aaKnown RBP8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 ZNF468Q5VIY5 522 aaPredicted RBP8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 LDHAL6AQ6ZMR3 332 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 ANKRD18AQ8IVF6 992 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 RPGRQ92834 1020 aaKnown RBP8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 CRAMP1Q96RY5 1269 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 DNAJC25Q9H1X3 360 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 GREM2Q9H772 168 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 ZFYVE28Q9HCC9 887 aa8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 BSDC1Q9NW68 430 aaPredicted RBP8.68□□□□□ -1.02
R3HDM1-210ENST00000443537 ZNF609O15014 1411 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 MAP3K6O95382 1288 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 CYP2E1P05181 493 aaPredicted RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 POLR3DP05423 398 aaPredicted RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 IFIT2P09913 472 aaKnown RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 COL11A2P13942 1736 aaPredicted RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 HCLS1P14317 486 aaPredicted RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 ALDH1B1P30837 517 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 MAP2K3P46734 347 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 PLAURQ03405 335 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 DDR1Q08345 913 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 NFX1Q12986 1120 aaKnown RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 C10orf71Q711Q0 1435 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 DHX32Q7L7V1 743 aaKnown RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 OR13H1Q8NG92 308 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 RBM17Q96I25 401 aaKnown RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 UBE2OQ9C0C9 1292 aaKnown RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 LNPKQ9C0E8 428 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 ANKRD2Q9GZV1 360 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 CNNM1Q9NRU3 951 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 TLR7Q9NYK1 1049 aaKnown RBP8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 KANSL3Q9P2N6 904 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 WWC3Q9ULE0 1092 aa8.67□□□□□ -1.02
R3HDM1-210ENST00000443537 MYH7P12883 1935 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 TAF1P21675 1872 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 BRCA1P38398 1863 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms