RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 SMARCA1P28370 1054 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 GMPSP49915 693 aaPredicted RBP16.8■□□□□ 0.28
LINC00299-202ENST00000442956 SEPT2Q15019 361 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 PTPAQ15257 358 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 TMEM39BQ9GZU3 492 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 UBA5Q9GZZ9 404 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 NUP62CLQ9H1M0 184 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 DDX19AQ9NUU7 478 aaKnown RBP16.8■□□□□ 0.28
LINC00299-202ENST00000442956 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00299-202ENST00000442956 EEF2P13639 858 aaKnown RBP16.8■□□□□ 0.28
LINC00299-202ENST00000442956 MARCKSP29966 332 aaPredicted RBP16.8■□□□□ 0.28
LINC00299-202ENST00000442956 MMP14P50281 582 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 WWC2Q6AWC2 1192 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 CCDC73Q6ZRK6 1079 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 HEATR3Q7Z4Q2 680 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 FAM83AQ86UY5 434 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 FSIP1Q8NA03 581 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 GOLPH3LQ9H4A5 285 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 NYAP2Q9P242 653 aa16.8■□□□□ 0.28
LINC00299-202ENST00000442956 A0A1W2PQ27 194 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 A0A1W2PQ64 194 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 A0A1W2PQD8 194 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 FAM205CA6NFA0 338 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 EGFRP00533 1210 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 CALML3P27482 149 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 ICA1Q05084 483 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 RRP1BQ14684 758 aaKnown RBP16.79■□□□□ 0.28
LINC00299-202ENST00000442956 EARS2Q5JPH6 523 aaKnown RBP16.79■□□□□ 0.28
LINC00299-202ENST00000442956 RBM26Q5T8P6 1007 aaKnown RBP16.79■□□□□ 0.28
LINC00299-202ENST00000442956 TYW1BQ6NUM6 668 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 HOMER1Q86YM7 354 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 RRP36Q96EU6 259 aaKnown RBP16.79■□□□□ 0.28
LINC00299-202ENST00000442956 FHDC1Q9C0D6 1143 aaPredicted RBP16.79■□□□□ 0.28
LINC00299-202ENST00000442956 VAT1LQ9HCJ6 419 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 GPCPD1Q9NPB8 672 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 BARHL2Q9NY43 387 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 MYH6P13533 1939 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 MYH8P13535 1937 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 GH2P01242 217 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 JAG1P78504 1218 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 ZNF543Q08ER8 600 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 CAMK4Q16566 473 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 MICALL2Q8IY33 904 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 JMYQ8N9B5 988 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 MRPS27Q92552 414 aaKnown RBP16.79■□□□□ 0.28
LINC00299-202ENST00000442956 TNFRSF25Q93038 417 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 MKL1Q969V6 931 aa16.79■□□□□ 0.28
LINC00299-202ENST00000442956 PPP6R2O75170 966 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 ATP2B1P20020 1258 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 AXDND1Q5T1B0 1012 aaPredicted RBP16.78■□□□□ 0.28
LINC00299-202ENST00000442956 ARHGAP27Q6ZUM4 889 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 SIAH1Q8IUQ4 282 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 DPF2Q92785 391 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 GREB1LQ9C091 1923 aaPredicted RBP16.78■□□□□ 0.28
LINC00299-202ENST00000442956 RIOX1Q9H6W3 641 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 SEC63Q9UGP8 760 aaKnown RBP16.78■□□□□ 0.28
LINC00299-202ENST00000442956 PCDHB6Q9Y5E3 794 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 ZNF541Q9H0D2 1346 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 STXBP3O00186 592 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 NOM1Q5C9Z4 860 aaKnown RBP16.78■□□□□ 0.28
LINC00299-202ENST00000442956 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 PIGSQ96S52 555 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 TSPY26PQ9H489 355 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 CLSTN2Q9H4D0 955 aa16.78■□□□□ 0.28
LINC00299-202ENST00000442956 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.78■□□□□ 0.28
LINC00299-202ENST00000442956 ADAMTS3O15072 1205 aa16.77■□□□□ 0.28
LINC00299-202ENST00000442956 FAM160A1Q05DH4 1040 aa16.77■□□□□ 0.28
LINC00299-202ENST00000442956 CCDC96Q2M329 555 aa16.77■□□□□ 0.28
LINC00299-202ENST00000442956 GPATCH4Q5T3I0 446 aaKnown RBP16.77■□□□□ 0.28
LINC00299-202ENST00000442956 BLIDQ8IZY5 108 aa16.77■□□□□ 0.28
LINC00299-202ENST00000442956 RBSNQ9H1K0 784 aa16.77■□□□□ 0.28
LINC00299-202ENST00000442956 TNMDQ9H2S6 317 aa16.77■□□□□ 0.28
LINC00299-202ENST00000442956 CNOT7Q9UIV1 285 aaKnown RBP16.77■□□□□ 0.28
LINC00299-202ENST00000442956 PCDHA4Q9UN74 947 aa16.77■□□□□ 0.28
LINC00299-202ENST00000442956 RAD21O60216 631 aa16.76■□□□□ 0.27
LINC00299-202ENST00000442956 SNW1Q13573 536 aaKnown RBP16.76■□□□□ 0.27
LINC00299-202ENST00000442956 MAP3K11Q16584 847 aa16.76■□□□□ 0.27
LINC00299-202ENST00000442956 SAMD7Q7Z3H4 446 aa16.76■□□□□ 0.27
LINC00299-202ENST00000442956 ENGASEQ8NFI3 743 aa16.76■□□□□ 0.27
LINC00299-202ENST00000442956 A0A1B0GVL5 298 aa16.76■□□□□ 0.27
LINC00299-202ENST00000442956 TRIM75PA6NK02 468 aa16.76■□□□□ 0.27
LINC00299-202ENST00000442956 TBC1D10BQ4KMP7 808 aaPredicted RBP16.76■□□□□ 0.27
LINC00299-202ENST00000442956 TTBK2Q6IQ55 1244 aa16.76■□□□□ 0.27
LINC00299-202ENST00000442956 KCTD1Q719H9 257 aa16.76■□□□□ 0.27
LINC00299-202ENST00000442956 NOL7Q9UMY1 257 aaKnown RBP16.76■□□□□ 0.27
LINC00299-202ENST00000442956 SCAF8Q9UPN6 1271 aaKnown RBP16.76■□□□□ 0.27
LINC00299-202ENST00000442956 ARFGEF1Q9Y6D6 1849 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 CMA1P23946 247 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 TNNI2P48788 182 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 NDUFA8P51970 172 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 NAPAP54920 295 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 RASA3Q14644 834 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 SLFN13Q68D06 897 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 PIK3AP1Q6ZUJ8 805 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 MIGA2Q7L4E1 593 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 FAM177A1Q8N128 213 aaPredicted RBP16.75■□□□□ 0.27
LINC00299-202ENST00000442956 PGAP2Q9UHJ9 254 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 CEP131Q9UPN4 1083 aa16.75■□□□□ 0.27
LINC00299-202ENST00000442956 TBC1D12O60347 775 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms