RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TXNRD2Q9NNW7 524 aa18.85■□□□□ 0.61
USP39-205ENST00000442708 MTMR7Q9Y216 660 aa18.85■□□□□ 0.61
USP39-205ENST00000442708 SPDYE16A6NNV3 312 aaPredicted RBP18.84■□□□□ 0.61
USP39-205ENST00000442708 PRC1O43663 620 aa18.84■□□□□ 0.61
USP39-205ENST00000442708 CPA1P15085 419 aa18.84■□□□□ 0.61
USP39-205ENST00000442708 ANKRD13CQ8N6S4 541 aa18.84■□□□□ 0.61
USP39-205ENST00000442708 SMCR8Q8TEV9 937 aaPredicted RBP18.84■□□□□ 0.61
USP39-205ENST00000442708 GMCL1Q96IK5 515 aa18.84■□□□□ 0.61
USP39-205ENST00000442708 RBPJLQ9UBG7 517 aa18.84■□□□□ 0.61
USP39-205ENST00000442708 MGAMO43451 1857 aa18.84■□□□□ 0.61
USP39-205ENST00000442708 IFIT3O14879 490 aaKnown RBP18.83■□□□□ 0.6
USP39-205ENST00000442708 CNMDO75829 334 aa18.83■□□□□ 0.6
USP39-205ENST00000442708 ZKSCAN1P17029 563 aaPredicted RBP18.83■□□□□ 0.6
USP39-205ENST00000442708 EXOSC10Q01780 885 aaKnown RBP18.83■□□□□ 0.6
USP39-205ENST00000442708 COG2Q14746 738 aa18.83■□□□□ 0.6
USP39-205ENST00000442708 CCDC178Q5BJE1 867 aa18.83■□□□□ 0.6
USP39-205ENST00000442708 NEK1Q96PY6 1258 aa18.83■□□□□ 0.6
USP39-205ENST00000442708 LRRC2Q9BYS8 371 aa18.83■□□□□ 0.6
USP39-205ENST00000442708 FKTNO75072 461 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 FLOT1O75955 427 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 BMP3P12645 472 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 CTGFP29279 349 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 DSG3P32926 999 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 MCM5P33992 734 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 SP3Q02447 781 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 TMEM67Q5HYA8 995 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 KCTD1Q719H9 257 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 PNMA1Q8ND90 353 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 ATG4CQ96DT6 458 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 TCEANC2Q96MN5 208 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 ARHGAP39Q9C0H5 1083 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 BTBD7Q9P203 1132 aa18.82■□□□□ 0.6
USP39-205ENST00000442708 ECM2O94769 699 aaPredicted RBP18.81■□□□□ 0.6
USP39-205ENST00000442708 SNHG28P0DPA3 235 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 PDHBP11177 359 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 SLC1A4P43007 532 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 GCLCP48506 637 aaPredicted RBP18.81■□□□□ 0.6
USP39-205ENST00000442708 KRT32Q14532 448 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 Q3C1V9 767 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 IFIT1BQ5T764 474 aaKnown RBP18.81■□□□□ 0.6
USP39-205ENST00000442708 TTBK2Q6IQ55 1244 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 SAMD1Q6SPF0 538 aaPredicted RBP18.81■□□□□ 0.6
USP39-205ENST00000442708 LBX2Q6XYB7 198 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 CD99L2Q8TCZ2 262 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 JAKMIP1Q96N16 626 aaKnown RBP18.81■□□□□ 0.6
USP39-205ENST00000442708 KAT14Q9H8E8 782 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 LY9Q9HBG7 655 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 PRDM10Q9NQV6 1147 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 PPP1R9AQ9ULJ8 1098 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 ADAMTS5Q9UNA0 930 aa18.81■□□□□ 0.6
USP39-205ENST00000442708 FRMPD2Q68DX3 1309 aaPredicted RBP18.8■□□□□ 0.6
USP39-205ENST00000442708 TMEM232C9JQI7 657 aa18.8■□□□□ 0.6
USP39-205ENST00000442708 SH2B2O14492 632 aaPredicted RBP18.8■□□□□ 0.6
USP39-205ENST00000442708 WTAPQ15007 396 aa18.8■□□□□ 0.6
USP39-205ENST00000442708 DCAF4Q8WV16 495 aa18.8■□□□□ 0.6
USP39-205ENST00000442708 PAGR1Q9BTK6 254 aa18.8■□□□□ 0.6
USP39-205ENST00000442708 MORF4L1Q9UBU8 362 aa18.8■□□□□ 0.6
USP39-205ENST00000442708 LACTBP83111 547 aaPredicted RBP18.79■□□□□ 0.6
USP39-205ENST00000442708 FAM110CQ1W6H9 321 aa18.79■□□□□ 0.6
USP39-205ENST00000442708 DHX32Q7L7V1 743 aaKnown RBP18.79■□□□□ 0.6
USP39-205ENST00000442708 GPCPD1Q9NPB8 672 aa18.79■□□□□ 0.6
USP39-205ENST00000442708 HOXC10Q9NYD6 342 aa18.79■□□□□ 0.6
USP39-205ENST00000442708 FEM1BQ9UK73 627 aa18.79■□□□□ 0.6
USP39-205ENST00000442708 MYPNQ86TC9 1320 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 DOCK3Q8IZD9 2030 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 VWA5AO00534 786 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 GOLGA8HP0CJ92 632 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 SLC16A2P36021 539 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 ZNF543Q08ER8 600 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 SART3Q15020 963 aaKnown RBP18.78■□□□□ 0.6
USP39-205ENST00000442708 CCDC96Q2M329 555 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 REPS2Q8NFH8 660 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 KIFC2Q96AC6 838 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 TMEM87BQ96K49 555 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 SLF1Q9BQI6 1058 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 MTA3Q9BTC8 594 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 ISY1Q9ULR0 285 aaKnown RBP18.78■□□□□ 0.6
USP39-205ENST00000442708 RABGAP1Q9Y3P9 1069 aa18.78■□□□□ 0.6
USP39-205ENST00000442708 WDR19Q8NEZ3 1342 aa18.77■□□□□ 0.6
USP39-205ENST00000442708 ERICH2A1L162 156 aa18.77■□□□□ 0.6
USP39-205ENST00000442708 CASTP20810 708 aaKnown RBP18.77■□□□□ 0.6
USP39-205ENST00000442708 ERVK-9P63128 1117 aa18.77■□□□□ 0.6
USP39-205ENST00000442708 ERVK-24P63145 666 aa18.77■□□□□ 0.6
USP39-205ENST00000442708 TMEM132BQ14DG7 1078 aa18.77■□□□□ 0.6
USP39-205ENST00000442708 PRPF38AQ8NAV1 312 aaKnown RBP18.77■□□□□ 0.6
USP39-205ENST00000442708 GPRC5AQ8NFJ5 357 aa18.77■□□□□ 0.6
USP39-205ENST00000442708 GTF3C2Q8WUA4 911 aaPredicted RBP18.77■□□□□ 0.6
USP39-205ENST00000442708 TRIM47Q96LD4 638 aa18.77■□□□□ 0.6
USP39-205ENST00000442708 CPVLQ9H3G5 476 aa18.77■□□□□ 0.6
USP39-205ENST00000442708 PLXNB2O15031 1838 aa18.77■□□□□ 0.59
USP39-205ENST00000442708 PLA2G6O60733 806 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 RPS6KB1P23443 525 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 STAT2P52630 851 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 SNAP25P60880 206 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 TROAPQ12815 778 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 BLOC1S2Q6QNY1 142 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 BTNL9Q6UXG8 535 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 STAG2Q8N3U4 1231 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 ERO1AQ96HE7 468 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 MYL10Q9BUA6 226 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms