RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SPDYE16A6NNV3 312 aaPredicted RBP14.48□□□□□ -0.09
USP1-203ENST00000442679 IFIT3O14879 490 aaKnown RBP14.48□□□□□ -0.09
USP1-203ENST00000442679 EPB41L2O43491 1005 aaKnown RBP14.48□□□□□ -0.09
USP1-203ENST00000442679 PEX10O60683 326 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 ECM2O94769 699 aaPredicted RBP14.48□□□□□ -0.09
USP1-203ENST00000442679 HSPA4P34932 840 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 SLC1A4P43007 532 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 LACTBP83111 547 aaPredicted RBP14.48□□□□□ -0.09
USP1-203ENST00000442679 ARHGEF6Q15052 776 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 FAM110CQ1W6H9 321 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 TSGA10IPQ3SY00 556 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 COL13A1Q5TAT6 717 aaPredicted RBP14.48□□□□□ -0.09
USP1-203ENST00000442679 POTEEQ6S8J3 1075 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 LBX2Q6XYB7 198 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 GPRC5AQ8NFJ5 357 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 DCAF4Q8WV16 495 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 USP26Q9BXU7 913 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 KAT14Q9H8E8 782 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 TXNRD2Q9NNW7 524 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 MORF4L1Q9UBU8 362 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 FEM1BQ9UK73 627 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 RABGAP1Q9Y3P9 1069 aa14.48□□□□□ -0.09
USP1-203ENST00000442679 ERICH2A1L162 156 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 TMEM232C9JQI7 657 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 MCM5P33992 734 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 PSMC4P43686 418 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 ANTXR2P58335 489 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 KRT32Q14532 448 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 SART3Q15020 963 aaKnown RBP14.47□□□□□ -0.09
USP1-203ENST00000442679 SEC23AQ15436 765 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 IFIT1BQ5T764 474 aaKnown RBP14.47□□□□□ -0.09
USP1-203ENST00000442679 PNMA1Q8ND90 353 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 KCNB2Q92953 911 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 ATG4CQ96DT6 458 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 SLF1Q9BQI6 1058 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 ARHGAP39Q9C0H5 1083 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 EFCC1Q9HA90 598 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 PPP1R9AQ9ULJ8 1098 aa14.47□□□□□ -0.09
USP1-203ENST00000442679 MYPNQ86TC9 1320 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 PRC1O43663 620 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 EIF5BO60841 1220 aaKnown RBP14.46□□□□□ -0.09
USP1-203ENST00000442679 CNMDO75829 334 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 FMNL1O95466 1100 aaPredicted RBP14.46□□□□□ -0.09
USP1-203ENST00000442679 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 ERVK-24P63145 666 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 CAP1Q01518 475 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 WTAPQ15007 396 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 CCDC96Q2M329 555 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 Q3C1V9 767 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 TMEM67Q5HYA8 995 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 KCTD1Q719H9 257 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 CTU1Q7Z7A3 348 aaKnown RBP14.46□□□□□ -0.09
USP1-203ENST00000442679 MB21D1Q8N884 522 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 PRPF38AQ8NAV1 312 aaKnown RBP14.46□□□□□ -0.09
USP1-203ENST00000442679 CHURC1Q8WUH1 139 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 NEK1Q96PY6 1258 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 BTBD7Q9P203 1132 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 SNX14Q9Y5W7 946 aa14.46□□□□□ -0.09
USP1-203ENST00000442679 VWA5AO00534 786 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 CTGFP29279 349 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 FCGRTP55899 365 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 IKQ13123 557 aaPredicted RBP14.45□□□□□ -0.1
USP1-203ENST00000442679 COL9A3Q14050 684 aaPredicted RBP14.45□□□□□ -0.1
USP1-203ENST00000442679 ADCK5Q3MIX3 580 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 RASGRP2Q7LDG7 609 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 OTOP1Q7RTM1 612 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 IGDCC4Q8TDY8 1250 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 KIFC2Q96AC6 838 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 TRIM47Q96LD4 638 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 MTA3Q9BTC8 594 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 GPCPD1Q9NPB8 672 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 ADAMTS5Q9UNA0 930 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 TRIM17Q9Y577 477 aa14.45□□□□□ -0.1
USP1-203ENST00000442679 FRMPD2Q68DX3 1309 aaPredicted RBP14.44□□□□□ -0.1
USP1-203ENST00000442679 PLA2G6O60733 806 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 ZBED4O75132 1171 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 SNHG28P0DPA3 235 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 PDHBP11177 359 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 STAT2P52630 851 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 CCNA1P78396 465 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 PLS1Q14651 629 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 FAM160B2Q86V87 743 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 CCAR1Q8IX12 1150 aaKnown RBP14.44□□□□□ -0.1
USP1-203ENST00000442679 TMEM87BQ96K49 555 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 SENP2Q9HC62 589 aa14.44□□□□□ -0.1
USP1-203ENST00000442679 CTDP1Q9Y5B0 961 aaPredicted RBP14.44□□□□□ -0.1
USP1-203ENST00000442679 MYH4Q9Y623 1939 aa14.43□□□□□ -0.1
USP1-203ENST00000442679 TNPO2O14787 897 aaKnown RBP14.43□□□□□ -0.1
USP1-203ENST00000442679 SEC24BO95487 1268 aa14.43□□□□□ -0.1
USP1-203ENST00000442679 GNRH1P01148 92 aa14.43□□□□□ -0.1
USP1-203ENST00000442679 HMGB1P09429 215 aaKnown RBP14.43□□□□□ -0.1
USP1-203ENST00000442679 HOXD10P28358 340 aa14.43□□□□□ -0.1
USP1-203ENST00000442679 ZNF543Q08ER8 600 aa14.43□□□□□ -0.1
USP1-203ENST00000442679 TMEM132BQ14DG7 1078 aa14.43□□□□□ -0.1
USP1-203ENST00000442679 TTBK2Q6IQ55 1244 aa14.43□□□□□ -0.1
USP1-203ENST00000442679 DHX32Q7L7V1 743 aaKnown RBP14.43□□□□□ -0.1
USP1-203ENST00000442679 TMTC2Q8N394 836 aa14.43□□□□□ -0.1
USP1-203ENST00000442679 JAKMIP1Q96N16 626 aaKnown RBP14.43□□□□□ -0.1
USP1-203ENST00000442679 LRRC2Q9BYS8 371 aa14.43□□□□□ -0.1
USP1-203ENST00000442679 SPATC1LQ9H0A9 340 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms