RNA–Protein interactions for RNA: ENST00000442225.5

MDH1-207, Transcript of malate dehydrogenase 1, humanhuman

TSL 5

Gene MDH1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-207ENST00000442225 ZNF408Q9H9D4 720 aa6.55□□□□□ -1.36
MDH1-207ENST00000442225 ATG3Q9NT62 314 aa6.55□□□□□ -1.36
MDH1-207ENST00000442225 HIF3AQ9Y2N7 669 aa6.55□□□□□ -1.36
MDH1-207ENST00000442225 ZNF831Q5JPB2 1677 aa6.55□□□□□ -1.36
MDH1-207ENST00000442225 SLX4Q8IY92 1834 aa6.55□□□□□ -1.36
MDH1-207ENST00000442225 SCN11AQ9UI33 1791 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 ZNF541Q9H0D2 1346 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 COL6A3P12111 3177 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 ANKRD31Q8N7Z5 1873 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 COL11A2P13942 1736 aaPredicted RBP6.54□□□□□ -1.36
MDH1-207ENST00000442225 NRXN2Q9P2S2 1712 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 DDX3YO15523 660 aaKnown RBP6.54□□□□□ -1.36
MDH1-207ENST00000442225 CELF2O95319 508 aaKnown RBP6.54□□□□□ -1.36
MDH1-207ENST00000442225 MPSTP25325 297 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 TM4SF1P30408 202 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 ARL4DP49703 201 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 C8orf34Q49A92 452 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 USPL1Q5W0Q7 1092 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 CST9Q5W186 159 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 INTS5Q6P9B9 1019 aaKnown RBP6.54□□□□□ -1.36
MDH1-207ENST00000442225 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.54□□□□□ -1.36
MDH1-207ENST00000442225 CTU1Q7Z7A3 348 aaKnown RBP6.54□□□□□ -1.36
MDH1-207ENST00000442225 ZDHHC13Q8IUH4 622 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 FAM20CQ8IXL6 584 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 UBASH3BQ8TF42 649 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 NXPE3Q969Y0 559 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 FAM83CQ9BQN1 747 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 DBNDD2Q9BQY9 259 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 C7orf69Q9H7B7 122 aa6.54□□□□□ -1.36
MDH1-207ENST00000442225 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.54□□□□□ -1.36
MDH1-207ENST00000442225 PITPNM2Q9BZ72 1349 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 EIF4EBP3O60516 100 aaPredicted RBP6.53□□□□□ -1.36
MDH1-207ENST00000442225 TRPA1O75762 1119 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 FAM13AO94988 1023 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 BRD1O95696 1058 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 SERPINB2P05120 415 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 EDN3P14138 238 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 SSTR4P31391 388 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 CRKLP46109 303 aaKnown RBP6.53□□□□□ -1.36
MDH1-207ENST00000442225 C19orf57Q0VDD7 668 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 SAPCD2Q86UD0 394 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 TRIM42Q8IWZ5 723 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 BSNDQ8WZ55 320 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 COG3Q96JB2 828 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 SOX17Q9H6I2 414 aaPredicted RBP6.53□□□□□ -1.36
MDH1-207ENST00000442225 SPG7Q9UQ90 795 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 MTMR7Q9Y216 660 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 SBNO2Q9Y2G9 1366 aa6.53□□□□□ -1.36
MDH1-207ENST00000442225 LTBP3Q9NS15 1303 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 TRIOBPQ9H2D6 2365 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 ARFGEF2Q9Y6D5 1785 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 NPHP1O15259 732 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
MDH1-207ENST00000442225 TNFRSF21O75509 655 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 ACPPP15309 386 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 GRIK1P39086 918 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 KCNA1Q09470 495 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 NOGQ13253 232 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 NFIXQ14938 502 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 RRS1Q15050 365 aaKnown RBP6.52□□□□□ -1.37
MDH1-207ENST00000442225 SYNE4Q8N205 404 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 SNX29Q8TEQ0 813 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 OSMRQ99650 979 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 BHLHE41Q9C0J9 482 aaPredicted RBP6.52□□□□□ -1.37
MDH1-207ENST00000442225 HDAC9Q9UKV0 1011 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 POLIQ9UNA4 740 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 KDRP35968 1356 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 CARMIL3Q8ND23 1372 aa6.52□□□□□ -1.37
MDH1-207ENST00000442225 EDC4Q6P2E9 1401 aaKnown RBP6.51□□□□□ -1.37
MDH1-207ENST00000442225 HMX2A2RU54 273 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 A6NHS1 94 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 MED26O95402 600 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 TGFB1P01137 390 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 SOGA3Q5TF21 947 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 VN1R5Q7Z5H4 357 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 KRTAP4-12Q9BQ66 201 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 ZKSCAN3Q9BRR0 538 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 RUSC1Q9BVN2 902 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 SUGCTQ9HAC7 445 aa6.51□□□□□ -1.37
MDH1-207ENST00000442225 ZNF277Q9NRM2 450 aaPredicted RBP6.51□□□□□ -1.37
MDH1-207ENST00000442225 PAPPA2Q9BXP8 1791 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 RTL1A6NKG5 1358 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 PRR19A6NJB7 356 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 SOX1O00570 391 aaPredicted RBP6.5□□□□□ -1.37
MDH1-207ENST00000442225 PHACTR2O75167 634 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 BMP3P12645 472 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 SPINK2P20155 84 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 PDE6BP35913 854 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 PREPP48147 710 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 NLRP12P59046 1061 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 FKBP4Q02790 459 aaKnown RBP eCLIP6.5□□□□□ -1.37
MDH1-207ENST00000442225 IKBKEQ14164 716 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 PRPF40BQ6NWY9 871 aaKnown RBP6.5□□□□□ -1.37
MDH1-207ENST00000442225 FDX2Q6P4F2 183 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 IFNL2Q8IZJ0 200 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 GPC2Q8N158 579 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 HHIPQ96QV1 700 aa6.5□□□□□ -1.37
MDH1-207ENST00000442225 SAGE1Q9NXZ1 904 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms