RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SLFN13Q68D06 897 aa17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 POTEEQ6S8J3 1075 aa17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 LRRC47Q8N1G4 583 aaKnown RBP17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 ANKS1AQ92625 1134 aa17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 ZSWIM5Q9P217 1185 aa17.71■□□□□ 0.43
CSNK1E-210ENST00000442216 CNMDO75829 334 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 RCSD1Q6JBY9 416 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 NCOA7Q8NI08 942 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 COA7Q96BR5 231 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 TMEM47Q9BQJ4 181 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 PAGR1Q9BTK6 254 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 SRRDQ9UH36 339 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 FEM1BQ9UK73 627 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 PPP1R9AQ9ULJ8 1098 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 PLXNB2O15031 1838 aa17.7■□□□□ 0.42
CSNK1E-210ENST00000442216 E7EWF7 191 aa17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 TNPO2O14787 897 aaKnown RBP17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 EPB41L2O43491 1005 aaKnown RBP17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 PLA2G6O60733 806 aa17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 BMP3P12645 472 aa17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 MAPK4P31152 587 aa17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 Q3C1V9 767 aa17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 PRPF38AQ8NAV1 312 aaKnown RBP17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 NKX2-3Q8TAU0 364 aa17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 DCAF4Q8WV16 495 aa17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 ZSCAN10Q96SZ4 725 aaPredicted RBP17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 SLF1Q9BQI6 1058 aa17.69■□□□□ 0.42
CSNK1E-210ENST00000442216 SLC27A2O14975 620 aa17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 FDX1P10109 184 aa17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 SLC1A4P43007 532 aa17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 RALYLQ86SE5 291 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 FAM160B2Q86V87 743 aa17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 ATG4CQ96DT6 458 aa17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 ABHD8Q96I13 439 aa17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 NUP88Q99567 741 aaPredicted RBP17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 UBAC1Q9BSL1 405 aa17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 BTBD7Q9P203 1132 aa17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 ZNFX1Q9P2E3 1918 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-210ENST00000442216 VWA5AO00534 786 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 REC8O95072 547 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 CREB3L3Q68CJ9 461 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 CCAR1Q8IX12 1150 aaKnown RBP17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 SHCBP1Q8NEM2 672 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 CHURC1Q8WUH1 139 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 ZKSCAN3Q9BRR0 538 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 MTA3Q9BTC8 594 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 HPS5Q9UPZ3 1129 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 TNKSO95271 1327 aa17.67■□□□□ 0.42
CSNK1E-210ENST00000442216 MCCP23508 829 aa17.66■□□□□ 0.42
CSNK1E-210ENST00000442216 STAT2P52630 851 aa17.66■□□□□ 0.42
CSNK1E-210ENST00000442216 IRF5Q13568 498 aa17.66■□□□□ 0.42
CSNK1E-210ENST00000442216 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
CSNK1E-210ENST00000442216 STOX1Q6ZVD7 989 aa17.66■□□□□ 0.42
CSNK1E-210ENST00000442216 ENAHQ8N8S7 591 aaPredicted RBP17.66■□□□□ 0.42
CSNK1E-210ENST00000442216 SPATC1LQ9H0A9 340 aa17.66■□□□□ 0.42
CSNK1E-210ENST00000442216 ZNF236Q9UL36 1845 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 TMEM232C9JQI7 657 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 ATP2A1O14983 1001 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 PEX10O60683 326 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 SNHG28P0DPA3 235 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 COPB2P35606 906 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 SART3Q15020 963 aaKnown RBP17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 SEC23AQ15436 765 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 CYB5R4Q7L1T6 521 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 MB21D2Q8IYB1 491 aaPredicted RBP17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 REPS2Q8NFH8 660 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 PORCNQ9H237 461 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 KAT14Q9H8E8 782 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 PTCH2Q9Y6C5 1203 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 TAF6LQ9Y6J9 622 aa17.65■□□□□ 0.42
CSNK1E-210ENST00000442216 ERICH2A1L162 156 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 SLC25A27O95847 323 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 PDHBP11177 359 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 OAZ1P54368 228 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 PRKCZQ05513 592 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 TMEM132BQ14DG7 1078 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 IFIT1BQ5T764 474 aaKnown RBP17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 BTNL9Q6UXG8 535 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 GPR142Q7Z601 462 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 PLEKHH3Q7Z736 793 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 PNMA1Q8ND90 353 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 RAET1EQ8TD07 263 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 PXYLP1Q8TE99 480 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 SOCS4Q8WXH5 440 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 MOV10L1Q9BXT6 1211 aaKnown RBP17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 MROH8Q9H579 483 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 GJD2Q9UKL4 321 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 GABRQQ9UN88 632 aa17.64■□□□□ 0.41
CSNK1E-210ENST00000442216 STRNO43815 780 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 ZBED4O75132 1171 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 ECM2O94769 699 aaPredicted RBP17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 FLT3LGP49771 235 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 KRT32Q14532 448 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 GPATCH4Q5T3I0 446 aaKnown RBP17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 SAMD1Q6SPF0 538 aaPredicted RBP17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 KCTD1Q719H9 257 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 NBPF11Q86T75 865 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms