RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KCNH4Q9UQ05 1017 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 TIAM2Q8IVF5 1701 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CHD4Q14839 1912 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CTIFO43310 598 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 TFRCP02786 760 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 EXOSC10Q01780 885 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CSPP1Q1MSJ5 1256 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 IFIT1BQ5T764 474 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 SLFN13Q68D06 897 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CCDC174Q6PII3 467 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 TMED8Q6PL24 325 aaPredicted RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CATIPQ7Z7H3 387 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 RASAL3Q86YV0 1011 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 NECAB1Q8N987 351 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 KRT23Q9C075 422 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 PUS7LQ9H0K6 701 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 DCP1AQ9NPI6 582 aaPredicted RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 HELLSQ9NRZ9 838 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 KIAA0100Q14667 2235 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CNTNAP1P78357 1384 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 SLC10A3P09131 477 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 ALAS1P13196 640 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 MSNP26038 577 aaKnown RBP8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 EVCP57679 992 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 HMGN5P82970 282 aaKnown RBP8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 PPARAQ07869 468 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 GIMAP6Q6P9H5 292 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 RNF208Q9H0X6 261 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 GPHNQ9NQX3 736 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 PYCARDQ9ULZ3 195 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 RGPD3A6NKT7 1758 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 RGPD4Q7Z3J3 1758 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 GTF3C6Q969F1 213 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 SYAP1Q96A49 352 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 IDI2Q9BXS1 227 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 R3HCC1Q9Y3T6 440 aaKnown RBP8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 CYP46A1Q9Y6A2 500 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 PTPDC1A2A3K4 754 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 SPDYE5A6NIY4 337 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 TMEM232C9JQI7 657 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 IGSF3O75054 1194 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 SNW1Q13573 536 aaKnown RBP8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 TMEM67Q5HYA8 995 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 GPRC5AQ8NFJ5 357 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 CUL5Q93034 780 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 TRIM47Q96LD4 638 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 CNNM2Q9H8M5 875 aa8.5□□□□□ -1.05
CDC42BPA-208ENST00000442054 UQCRHLA0A096LP55 91 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 UQCRHP07919 91 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 IBSPP21815 317 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 GCLCP48506 637 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 PPP4CP60510 307 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 NOLC1Q14978 699 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 BRDTQ58F21 947 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 MFSD14CQ5VZR4 134 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 ZNF830Q96NB3 372 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 RPAP3Q9H6T3 665 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 DDX4Q9NQI0 724 aaKnown RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 LAMB2P55268 1798 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 PDIA4P13667 645 aaKnown RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 PSMA5P28066 241 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 ZNF76P36508 570 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 IQCB1Q15051 598 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 IFNL1Q8IU54 200 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 C17orf53Q8N3J3 647 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 ENGASEQ8NFI3 743 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 NCOA7Q8NI08 942 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 TTC12Q9H892 705 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 NOD1Q9Y239 953 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 CYP21A2P08686 494 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 TRAF1Q13077 416 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 WTAPQ15007 396 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 LEO1Q8WVC0 666 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 ANKRD7Q92527 254 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 OSBP2Q969R2 916 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 FAM163AQ96GL9 167 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 KCND1Q9NSA2 647 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 ZHX1Q9UKY1 873 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 SMC3Q9UQE7 1217 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 TAF1LQ8IZX4 1826 aa8.49□□□□□ -1.05
CDC42BPA-208ENST00000442054 PTPRAP18433 802 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 SOX10P56693 466 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 BACE1P56817 501 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 COG2Q14746 738 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 FAM173BQ6P4H8 233 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 DLEC1Q9Y238 1755 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 BTBD19C9JJ37 291 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 KIF5BP33176 963 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 CRHR2Q13324 411 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 ZNF296Q8WUU4 475 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 ZNF512BQ96KM6 892 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 NUP98P52948 1817 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 B4E1Z4 1266 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 TTLL1O95922 423 aa8.48□□□□□ -1.05
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