RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 C3orf67Q6ZVT6 689 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 ATP8A2Q9NTI2 1148 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 RMND1Q9NWS8 449 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 TTF2Q9UNY4 1162 aaKnown RBP18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 TSPY2A6NKD2 308 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 CHMP4BP1P59074 171 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 ARL6IP4Q66PJ3 421 aaKnown RBP18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 SRGAP1Q7Z6B7 1085 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 TMTC1Q8IUR5 882 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 RREB1Q92766 1687 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 KIF5BP33176 963 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 ZNF569Q5MCW4 686 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 ZNF658Q5TYW1 1059 aaPredicted RBP18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 FBXO33Q7Z6M2 555 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 MTRQ99707 1265 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 ARPP21Q9UBL0 812 aaPredicted RBP18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 CDC23Q9UJX2 597 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 WNK3Q9BYP7 1800 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 COBLO75128 1261 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 FECHP22830 423 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 CALML3P27482 149 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 EVX2Q03828 476 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 CEP112Q8N8E3 955 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 CELF1Q92879 486 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 VPS16Q9H269 839 aa18.64■□□□□ 0.57
SEMA3B-207ENST00000441915 SASH3O75995 380 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 LONP1P36776 959 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 TUBB2AQ13885 445 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 TRIM14Q14142 442 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 IL17AQ16552 155 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 NUP88Q99567 741 aaPredicted RBP18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 TUBB2BQ9BVA1 445 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 ZSWIM4Q9H7M6 989 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 ABHD10Q9NUJ1 306 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 COL22A1Q8NFW1 1626 aaPredicted RBP18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 A0A0U1RQJ8 604 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 COPB1P53618 953 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 TCP11X2Q5H9J9 407 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 NELFBQ8WX92 580 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 ATRIPQ8WXE1 791 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 A0A1B0GUL6 1792 aa18.63■□□□□ 0.57
SEMA3B-207ENST00000441915 TAF1P21675 1872 aa18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 CTAGE9A4FU28 777 aa18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 CCDC151A5D8V7 595 aa18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 RPN1P04843 607 aaKnown RBP18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 IRX5P78411 483 aaPredicted RBP18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 KIF4BQ2VIQ3 1234 aa18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 THRAP3Q9Y2W1 955 aaKnown RBP18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 SCN7AQ01118 1682 aa18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 VEGFAP15692 232 aaPredicted RBP18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 MARCH10Q8NA82 808 aaPredicted RBP18.62■□□□□ 0.57
SEMA3B-207ENST00000441915 ERICH4A6NGS2 130 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 KCNJ18B7U540 433 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 POLR3GO15318 223 aaPredicted RBP18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 KCNJ12Q14500 433 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 SBK1Q52WX2 424 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 SPATA31A1Q5TZJ5 1347 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 BLIDQ8IZY5 108 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 UBXN6Q9BZV1 441 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 KAT14Q9H8E8 782 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 TAB2Q9NYJ8 693 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 MYH13Q9UKX3 1938 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 MYH8P13535 1937 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 PDS5AQ29RF7 1337 aaKnown RBP18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 ADAMTS2O95450 1211 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 HIBADHP31937 336 aaKnown RBP18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 CYP2C19P33261 490 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 STAT6P42226 847 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 TUBB4BP68371 445 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 BRD3Q15059 726 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 ACRBPQ8NEB7 543 aa18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 PUF60Q9UHX1 559 aaKnown RBP18.61■□□□□ 0.57
SEMA3B-207ENST00000441915 PRDX5P30044 214 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 ERVK-24P63145 666 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 SMC1AQ14683 1233 aaKnown RBP18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 CYP2D6P10635 497 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 KLRK1P26718 216 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 CDC25AP30304 524 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 RCSD1Q6JBY9 416 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 BICDL1Q6ZP65 573 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 SH3GLB2Q9NR46 395 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 MYO1AQ9UBC5 1043 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 MAPK8IP1Q9UQF2 711 aa18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 COL16A1Q07092 1604 aaPredicted RBP18.6■□□□□ 0.57
SEMA3B-207ENST00000441915 POTEB2H3BUK9 544 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 H7C1D1 291 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 KRT9P35527 623 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 PRCPP42785 496 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 WWC2Q6AWC2 1192 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 SLC35F6Q8N357 371 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 FUT8Q9BYC5 575 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 DISC1Q9NRI5 854 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 MCM9Q9NXL9 1143 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 PCDHA4Q9UN74 947 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 GDAQ9Y2T3 454 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 ADAMTS3O15072 1205 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 UBXN1Q04323 297 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms