RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 DNAJC25Q9H1X3 360 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 KIAA1468Q9P260 1216 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 KCNH3Q9ULD8 1083 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 CCDC194A0A1B0GVG4 234 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 YDJCA8MPS7 323 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 ESPNB1AK53 854 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 GOLGA6L19H0YKK7 550 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 PTMAP06454 111 aaKnown RBP15.06■□□□□ 0
CPSF4-206ENST00000441580 PDHBP11177 359 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 DPEP1P16444 411 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 ATP2C1P98194 919 aaPredicted RBP15.06■□□□□ 0
CPSF4-206ENST00000441580 GPATCH4Q5T3I0 446 aaKnown RBP15.06■□□□□ 0
CPSF4-206ENST00000441580 RSBN1LQ6PCB5 846 aaPredicted RBP15.06■□□□□ 0
CPSF4-206ENST00000441580 NIM1KQ8IY84 436 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 LARGE2Q8N3Y3 721 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 GPKOWQ92917 476 aaPredicted RBP eCLIP15.06■□□□□ 0
CPSF4-206ENST00000441580 BPIFA3Q9BQP9 254 aa15.06■□□□□ 0
CPSF4-206ENST00000441580 CYTH3O43739 400 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 ADCY5O95622 1261 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 GNA11P29992 359 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 ORC2Q13416 577 aaPredicted RBP15.05■□□□□ -0
CPSF4-206ENST00000441580 CFAP100Q494V2 611 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 KANK3Q6NY19 840 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 KRBA2Q6ZNG9 492 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 PIK3AP1Q6ZUJ8 805 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 KRT25Q7Z3Z0 450 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 C6orf50Q9HD87 102 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 FAM198AQ9UFP1 575 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 COL4A5P29400 1685 aa15.05■□□□□ -0
CPSF4-206ENST00000441580 FAM205CA6NFA0 338 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 GOLGA6L6A8MZA4 724 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 TPM3P06753 285 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
CPSF4-206ENST00000441580 NAPAP54920 295 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 NLRP12P59046 1061 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 TPM4P67936 248 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 ZNF543Q08ER8 600 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 SLC35G1Q2M3R5 365 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 ARL6IP4Q66PJ3 421 aaKnown RBP15.04■□□□□ -0
CPSF4-206ENST00000441580 C11orf57Q6ZUT1 292 aaPredicted RBP15.04■□□□□ -0
CPSF4-206ENST00000441580 TMEM179Q6ZVK1 233 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.04■□□□□ -0
CPSF4-206ENST00000441580 LUZP1Q86V48 1076 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 METTL16Q86W50 562 aaKnown RBP15.04■□□□□ -0
CPSF4-206ENST00000441580 FOXP4Q8IVH2 680 aaPredicted RBP15.04■□□□□ -0
CPSF4-206ENST00000441580 LRRC47Q8N1G4 583 aaKnown RBP15.04■□□□□ -0
CPSF4-206ENST00000441580 CNNM3Q8NE01 707 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 DCAF4Q8WV16 495 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 CLIC6Q96NY7 704 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 MTFR1LQ9H019 292 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 ZMYND12Q9H0C1 365 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 RIOX1Q9H6W3 641 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 KCNQ5Q9NR82 932 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 TUBE1Q9UJT0 475 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 SYNPO2Q9UMS6 1093 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 MTMR7Q9Y216 660 aa15.04■□□□□ -0
CPSF4-206ENST00000441580 BECN2A8MW95 431 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 M0R2N6 131 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 LAD1O00515 517 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 MPHOSPH10O00566 681 aaKnown RBP15.03■□□□□ -0
CPSF4-206ENST00000441580 VIL1P09327 827 aaKnown RBP15.03■□□□□ -0
CPSF4-206ENST00000441580 ATP2B1P20020 1258 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 MMP14P50281 582 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 EARS2Q5JPH6 523 aaKnown RBP15.03■□□□□ -0
CPSF4-206ENST00000441580 USP17L2Q6R6M4 530 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 SARM1Q6SZW1 724 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 ZSCAN29Q8IWY8 852 aaPredicted RBP15.03■□□□□ -0
CPSF4-206ENST00000441580 AGBL3Q8NEM8 1001 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 PIBF1Q8WXW3 757 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 PDGFDQ9GZP0 370 aaPredicted RBP15.03■□□□□ -0
CPSF4-206ENST00000441580 DNAJC18Q9H819 358 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 KANSL2Q9H9L4 492 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 PIM2Q9P1W9 311 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 NYAP2Q9P242 653 aa15.03■□□□□ -0
CPSF4-206ENST00000441580 HERC5Q9UII4 1024 aaKnown RBP15.03■□□□□ -0
CPSF4-206ENST00000441580 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 USP17L5A8MUK1 530 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 SPDYE6P0CI01 402 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 GOLGA8HP0CJ92 632 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 KCNA3P22001 575 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 TXLNAP40222 546 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 IQCB1Q15051 598 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 CCDC96Q2M329 555 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 CERKLQ49MI3 558 aaPredicted RBP15.02■□□□□ -0
CPSF4-206ENST00000441580 TATDN1Q6P1N9 297 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 OGFOD1Q8N543 542 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 CSRNP2Q9H175 543 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 ZNRF3Q9ULT6 936 aa15.02■□□□□ -0
CPSF4-206ENST00000441580 DDTLA6NHG4 134 aaPredicted RBP15.01□□□□□ -0.01
CPSF4-206ENST00000441580 PSMD14O00487 310 aa15.01□□□□□ -0.01
CPSF4-206ENST00000441580 CDC25BP30305 580 aa15.01□□□□□ -0.01
CPSF4-206ENST00000441580 CACNB3P54284 484 aa15.01□□□□□ -0.01
CPSF4-206ENST00000441580 ICA1Q05084 483 aa15.01□□□□□ -0.01
CPSF4-206ENST00000441580 TCP10Q12799 353 aa15.01□□□□□ -0.01
CPSF4-206ENST00000441580 NONOQ15233 471 aaKnown RBP eCLIP15.01□□□□□ -0.01
CPSF4-206ENST00000441580 DALRD3Q5D0E6 543 aaKnown RBP15.01□□□□□ -0.01
CPSF4-206ENST00000441580 FKBP1CQ5VVH2 108 aa15.01□□□□□ -0.01
CPSF4-206ENST00000441580 TYW1BQ6NUM6 668 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms