RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 MTMR4Q9NYA4 1195 aa15.11■□□□□ 0.01
ACTN4-204ENST00000440400 SRPRBQ9Y5M8 271 aaKnown RBP15.11■□□□□ 0.01
ACTN4-204ENST00000440400 BMP15O95972 392 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 AKAP17AQ02040 695 aaKnown RBP15.1■□□□□ 0.01
ACTN4-204ENST00000440400 VPS54Q9P1Q0 977 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 CEP131Q9UPN4 1083 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 NR5A1Q13285 461 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 TAF3Q5VWG9 929 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 FAM198AQ9UFP1 575 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 hCG_1984214I3L0E3 225 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 CCDC93Q567U6 631 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 EARS2Q5JPH6 523 aaKnown RBP15.1■□□□□ 0.01
ACTN4-204ENST00000440400 TATDN1Q6P1N9 297 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 ZNF713Q8N859 430 aaPredicted RBP15.1■□□□□ 0.01
ACTN4-204ENST00000440400 KRI1Q8N9T8 703 aaKnown RBP15.1■□□□□ 0.01
ACTN4-204ENST00000440400 CEP95Q96GE4 821 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 PDGFDQ9GZP0 370 aaPredicted RBP15.1■□□□□ 0.01
ACTN4-204ENST00000440400 RIOX1Q9H6W3 641 aa15.1■□□□□ 0.01
ACTN4-204ENST00000440400 KINO60870 393 aaKnown RBP15.09■□□□□ 0.01
ACTN4-204ENST00000440400 CAMK4Q16566 473 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 TTLL6Q8N841 843 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 SERPINB13Q9UIV8 391 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 TUBE1Q9UJT0 475 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 STXBP3O00186 592 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 ENTPD3O75355 529 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 CALML3P27482 149 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 IQCB1Q15051 598 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 AOC3Q16853 763 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 MTMR14Q8NCE2 650 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 DNAJC18Q9H819 358 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 BARHL2Q9NY43 387 aa15.09■□□□□ 0.01
ACTN4-204ENST00000440400 ZNF202O95125 648 aa15.08■□□□□ 0.01
ACTN4-204ENST00000440400 VIL1P09327 827 aaKnown RBP15.08■□□□□ 0.01
ACTN4-204ENST00000440400 TGFB2P61812 414 aa15.08■□□□□ 0.01
ACTN4-204ENST00000440400 STX1AQ16623 288 aa15.08■□□□□ 0.01
ACTN4-204ENST00000440400 SYNPO2Q9UMS6 1093 aa15.08■□□□□ 0.01
ACTN4-204ENST00000440400 PCDHB6Q9Y5E3 794 aa15.08■□□□□ 0.01
ACTN4-204ENST00000440400 A0A1B0GVL5 298 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 ESYT2A0FGR8 921 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 MDM2Q00987 491 aaPredicted RBP15.08■□□□□ 0
ACTN4-204ENST00000440400 SOGA3Q5TF21 947 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 MKL1Q969V6 931 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 CCDC17Q96LX7 622 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 BRMS1Q9HCU9 246 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 PCDHA4Q9UN74 947 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 ERICH4A6NGS2 130 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 GNL2Q13823 731 aaKnown RBP15.08■□□□□ 0
ACTN4-204ENST00000440400 SH3BP5LQ7L8J4 393 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 MTMR8Q96EF0 704 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 CBX8Q9HC52 389 aa15.08■□□□□ 0
ACTN4-204ENST00000440400 AP5Z1O43299 807 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 ATP2C1P98194 919 aaPredicted RBP15.07■□□□□ 0
ACTN4-204ENST00000440400 ANO6Q4KMQ2 910 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 ASPRV1Q53RT3 343 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 KIAA1468Q9P260 1216 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 PDHBP11177 359 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 AKR1B1P15121 316 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 MMP14P50281 582 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 SCNN1DP51172 638 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 NT5DC1Q5TFE4 455 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 SARM1Q6SZW1 724 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 CKAP2LQ8IYA6 745 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 C4orf32Q8N8J7 132 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 ZBED3Q96IU2 234 aaPredicted RBP15.07■□□□□ 0
ACTN4-204ENST00000440400 ZMYND12Q9H0C1 365 aa15.07■□□□□ 0
ACTN4-204ENST00000440400 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.06■□□□□ 0
ACTN4-204ENST00000440400 VEGFAP15692 232 aaPredicted RBP15.06■□□□□ 0
ACTN4-204ENST00000440400 GTF2F1P35269 517 aaKnown RBP eCLIP15.06■□□□□ 0
ACTN4-204ENST00000440400 PLCB2Q00722 1185 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 NFIAQ12857 509 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 SF3B2Q13435 895 aaKnown RBP15.06■□□□□ 0
ACTN4-204ENST00000440400 WWC2Q6AWC2 1192 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 FERMT2Q96AC1 680 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 USP25Q9UHP3 1055 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 RIOK3O14730 519 aaKnown RBP15.06■□□□□ 0
ACTN4-204ENST00000440400 TYW1BQ6NUM6 668 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 DEFB132Q7Z7B7 95 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 PIBF1Q8WXW3 757 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 TTLL1O95922 423 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 HLA-DOAP06340 250 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 SLC4A8Q2Y0W8 1093 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 RSBN1LQ6PCB5 846 aaPredicted RBP15.06■□□□□ 0
ACTN4-204ENST00000440400 CCDC82Q8N4S0 544 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 CCDC148Q8NFR7 591 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 CABP5Q9NP86 173 aa15.06■□□□□ 0
ACTN4-204ENST00000440400 TRIM75PA6NK02 468 aa15.05■□□□□ -0
ACTN4-204ENST00000440400 ADAMTS3O15072 1205 aa15.05■□□□□ -0
ACTN4-204ENST00000440400 PARP1P09874 1014 aaKnown RBP15.05■□□□□ -0
ACTN4-204ENST00000440400 DPEP1P16444 411 aa15.05■□□□□ -0
ACTN4-204ENST00000440400 MARCKSP29966 332 aaPredicted RBP15.05■□□□□ -0
ACTN4-204ENST00000440400 PPP1R18Q6NYC8 613 aa15.05■□□□□ -0
ACTN4-204ENST00000440400 BLIDQ8IZY5 108 aa15.05■□□□□ -0
ACTN4-204ENST00000440400 FAM205CA6NFA0 338 aa15.05■□□□□ -0
ACTN4-204ENST00000440400 F8W031 263 aaPredicted RBP15.05■□□□□ -0
ACTN4-204ENST00000440400 WNT7AO00755 349 aa15.05■□□□□ -0
ACTN4-204ENST00000440400 ORC2Q13416 577 aaPredicted RBP15.05■□□□□ -0
ACTN4-204ENST00000440400 ZFPM1Q8IX07 1006 aa15.05■□□□□ -0
ACTN4-204ENST00000440400 SPATA20Q8TB22 786 aa15.05■□□□□ -0
ACTN4-204ENST00000440400 ANO10Q9NW15 660 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms