RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 TECP42680 631 aa22.83■■□□□ 1.25
FMR1-208ENST00000440235 MXRA7P84157 204 aa22.83■■□□□ 1.25
FMR1-208ENST00000440235 NPHP4O75161 1426 aaPredicted RBP22.83■■□□□ 1.25
FMR1-208ENST00000440235 FAM13AO94988 1023 aa22.83■■□□□ 1.25
FMR1-208ENST00000440235 HLA-DOAP06340 250 aa22.83■■□□□ 1.25
FMR1-208ENST00000440235 VPS41P49754 854 aa22.83■■□□□ 1.25
FMR1-208ENST00000440235 PLCD1P51178 756 aa22.83■■□□□ 1.25
FMR1-208ENST00000440235 PTPN12Q05209 780 aaKnown RBP22.83■■□□□ 1.25
FMR1-208ENST00000440235 SRGAP1Q7Z6B7 1085 aa22.83■■□□□ 1.25
FMR1-208ENST00000440235 DPH5Q9H2P9 285 aa22.83■■□□□ 1.25
FMR1-208ENST00000440235 RRP15Q9Y3B9 282 aaKnown RBP22.83■■□□□ 1.25
FMR1-208ENST00000440235 LPIN2Q92539 896 aa22.83■■□□□ 1.24
FMR1-208ENST00000440235 RABGGTAQ92696 567 aa22.83■■□□□ 1.24
FMR1-208ENST00000440235 SAMD15Q9P1V8 674 aa22.83■■□□□ 1.24
FMR1-208ENST00000440235 CYP2D7A0A087X1C5 515 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 PARP1P09874 1014 aaKnown RBP22.82■■□□□ 1.24
FMR1-208ENST00000440235 PHKG2P15735 406 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 FAM212AQ96EL1 285 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 LRRC27Q9C0I9 530 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 BIN2Q9UBW5 565 aaPredicted RBP22.82■■□□□ 1.24
FMR1-208ENST00000440235 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.82■■□□□ 1.24
FMR1-208ENST00000440235 REREQ9P2R6 1566 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 FRMD3A2A2Y4 597 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 CABP7Q86V35 215 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 POLD4Q9HCU8 107 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 ZMYM1Q5SVZ6 1142 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 SPATA1Q5VX52 437 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 PCDHB6Q9Y5E3 794 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 A0A1W2PQ27 194 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 A0A1W2PQ64 194 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 A0A1W2PQD8 194 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 SPDYE3A6NKU9 549 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 ERBB3P21860 1342 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 TEX11Q8IYF3 940 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 PCDHB13Q9Y5F0 798 aa22.82■■□□□ 1.24
FMR1-208ENST00000440235 B4DLN1 442 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 ECM2O94769 699 aaPredicted RBP22.81■■□□□ 1.24
FMR1-208ENST00000440235 TUBB4BP68371 445 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 IFT20Q8IY31 132 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 TTC14Q96N46 770 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 TCHPQ9BT92 498 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 SPOPO43791 374 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 PPARAQ07869 468 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 PPP1R14CQ8TAE6 165 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 PPP1R12CQ9BZL4 782 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 SLC7A5Q01650 507 aa22.81■■□□□ 1.24
FMR1-208ENST00000440235 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.81■■□□□ 1.24
FMR1-208ENST00000440235 KCNK3O14649 394 aa22.8■■□□□ 1.24
FMR1-208ENST00000440235 ARHGAP44Q17R89 818 aa22.8■■□□□ 1.24
FMR1-208ENST00000440235 IKBKGQ9Y6K9 419 aa22.8■■□□□ 1.24
FMR1-208ENST00000440235 UAP1Q16222 522 aaPredicted RBP22.8■■□□□ 1.24
FMR1-208ENST00000440235 ABCB6Q9NP58 842 aa22.8■■□□□ 1.24
FMR1-208ENST00000440235 PDE8AO60658 829 aa22.8■■□□□ 1.24
FMR1-208ENST00000440235 GUCY2DQ02846 1103 aa22.8■■□□□ 1.24
FMR1-208ENST00000440235 ZYXQ15942 572 aaKnown RBP22.8■■□□□ 1.24
FMR1-208ENST00000440235 B4GALNT4Q76KP1 1039 aa22.8■■□□□ 1.24
FMR1-208ENST00000440235 FOXN1O15353 648 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 EHHADHQ08426 723 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 PPFIA1Q13136 1202 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 CALCOCO2Q13137 446 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 TCIRG1Q13488 830 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 POLA2Q14181 598 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 MAN1B1Q9UKM7 699 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 HARSP12081 509 aaKnown RBP22.79■■□□□ 1.24
FMR1-208ENST00000440235 TRIM14Q14142 442 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 TOGARAM2Q6ZUX3 1019 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 RBM28Q9NW13 759 aaKnown RBP22.79■■□□□ 1.24
FMR1-208ENST00000440235 NRKQ7Z2Y5 1582 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 SRGAP2O75044 1071 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 BTG4Q9NY30 223 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 DDB1Q16531 1140 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 CNNM4Q6P4Q7 775 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 LMBR1Q8WVP7 490 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 FERMT2Q96AC1 680 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 RASAL2Q9UJF2 1139 aa22.79■■□□□ 1.24
FMR1-208ENST00000440235 ZMYM6O95789 1325 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 RNF40O75150 1001 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 COPB1P53618 953 aaKnown RBP22.78■■□□□ 1.24
FMR1-208ENST00000440235 RPS6KA1Q15418 735 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 CFAP221Q4G0U5 840 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 GSPT2Q8IYD1 628 aaKnown RBP22.78■■□□□ 1.24
FMR1-208ENST00000440235 TGFBRAP1Q8WUH2 860 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 NSRP1Q9H0G5 558 aaKnown RBP22.78■■□□□ 1.24
FMR1-208ENST00000440235 CETN3O15182 167 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 SLF2Q8IX21 1173 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 ANKRD42Q8N9B4 389 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 POLR3EQ9NVU0 708 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 CLNS1AP54105 237 aaKnown RBP22.78■■□□□ 1.24
FMR1-208ENST00000440235 CCDC65Q8IXS2 484 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 ADAM21Q9UKJ8 722 aa22.78■■□□□ 1.24
FMR1-208ENST00000440235 HIBADHP31937 336 aaKnown RBP22.77■■□□□ 1.24
FMR1-208ENST00000440235 LRRC41Q15345 812 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 STXBP4Q6ZWJ1 553 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 SYNE4Q8N205 404 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 ZSWIM5Q9P217 1185 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 STK38LQ9Y2H1 464 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 CCDC160A6NGH7 325 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 RASSF7Q02833 373 aa22.77■■□□□ 1.24
FMR1-208ENST00000440235 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.77■■□□□ 1.24
FMR1-208ENST00000440235 CAPS2Q9BXY5 557 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms