RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 TNFRSF25Q93038 417 aa17.14■□□□□ 0.33
IFT140-204ENST00000439987 CLIP2Q9UDT6 1046 aa17.14■□□□□ 0.33
IFT140-204ENST00000439987 CD2APQ9Y5K6 639 aa17.14■□□□□ 0.33
IFT140-204ENST00000439987 USP17L5A8MUK1 530 aa17.14■□□□□ 0.33
IFT140-204ENST00000439987 MPHOSPH10O00566 681 aaKnown RBP17.14■□□□□ 0.33
IFT140-204ENST00000439987 SMARCA1P28370 1054 aa17.14■□□□□ 0.33
IFT140-204ENST00000439987 NDUFA8P51970 172 aa17.14■□□□□ 0.33
IFT140-204ENST00000439987 LRRC47Q8N1G4 583 aaKnown RBP17.14■□□□□ 0.33
IFT140-204ENST00000439987 AGBL3Q8NEM8 1001 aa17.14■□□□□ 0.33
IFT140-204ENST00000439987 COL2A1P02458 1487 aaPredicted RBP17.13■□□□□ 0.33
IFT140-204ENST00000439987 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 CTAGE5O15320 804 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 PDHBP11177 359 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 EARS2Q5JPH6 523 aaKnown RBP17.13■□□□□ 0.33
IFT140-204ENST00000439987 METTL16Q86W50 562 aaKnown RBP17.13■□□□□ 0.33
IFT140-204ENST00000439987 GPKOWQ92917 476 aaPredicted RBP eCLIP17.13■□□□□ 0.33
IFT140-204ENST00000439987 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 TMOD2Q9NZR1 351 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 PCDHB6Q9Y5E3 794 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 FAM205CA6NFA0 338 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 CALML3P27482 149 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 CXCL9Q07325 125 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 TATDN1Q6P1N9 297 aa17.13■□□□□ 0.33
IFT140-204ENST00000439987 SNHG28P0DPA3 235 aa17.12■□□□□ 0.33
IFT140-204ENST00000439987 CERKLQ49MI3 558 aaPredicted RBP17.12■□□□□ 0.33
IFT140-204ENST00000439987 CPVLQ9H3G5 476 aa17.12■□□□□ 0.33
IFT140-204ENST00000439987 CEP131Q9UPN4 1083 aa17.12■□□□□ 0.33
IFT140-204ENST00000439987 CUTAO60888 179 aa17.12■□□□□ 0.33
IFT140-204ENST00000439987 ASPRV1Q53RT3 343 aa17.12■□□□□ 0.33
IFT140-204ENST00000439987 WWC2Q6AWC2 1192 aa17.12■□□□□ 0.33
IFT140-204ENST00000439987 JDP2Q8WYK2 163 aa17.12■□□□□ 0.33
IFT140-204ENST00000439987 NFKBIEO00221 500 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 ATP2B1P20020 1258 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 TYRO3Q06418 890 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 KRI1Q8N9T8 703 aaKnown RBP17.11■□□□□ 0.33
IFT140-204ENST00000439987 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
IFT140-204ENST00000439987 BARHL2Q9NY43 387 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 TRIM75PA6NK02 468 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 PFKFB1P16118 471 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 TYW1BQ6NUM6 668 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 SHC4Q6S5L8 630 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 HEATR3Q7Z4Q2 680 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 FAM177A1Q8N128 213 aaPredicted RBP17.11■□□□□ 0.33
IFT140-204ENST00000439987 CCDC148Q8NFR7 591 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 RRP36Q96EU6 259 aaKnown RBP17.11■□□□□ 0.33
IFT140-204ENST00000439987 ZNF70Q9UC06 446 aaPredicted RBP17.11■□□□□ 0.33
IFT140-204ENST00000439987 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
IFT140-204ENST00000439987 BCS1LQ9Y276 419 aa17.11■□□□□ 0.33
IFT140-204ENST00000439987 CLRN2A0PK11 232 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 PTGER2P43116 358 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 NOM1Q5C9Z4 860 aaKnown RBP17.1■□□□□ 0.33
IFT140-204ENST00000439987 CIAPIN1Q6FI81 312 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 BLIDQ8IZY5 108 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 MTMR14Q8NCE2 650 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 CLIC6Q96NY7 704 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 CSRNP1Q96S65 589 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 PCDHA4Q9UN74 947 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 MYH4Q9Y623 1939 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 PSDA5PKW4 1024 aaPredicted RBP17.1■□□□□ 0.33
IFT140-204ENST00000439987 TCP10L2B9ZVM9 353 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 STXBP3O00186 592 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 SPDYE2Q495Y8 402 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 RESP18Q5W5W9 173 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 MTERF4Q7Z6M4 381 aaKnown RBP17.1■□□□□ 0.33
IFT140-204ENST00000439987 RIOX1Q9H6W3 641 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 KANSL2Q9H9L4 492 aa17.1■□□□□ 0.33
IFT140-204ENST00000439987 MORC2Q9Y6X9 1032 aaPredicted RBP17.1■□□□□ 0.33
IFT140-204ENST00000439987 FRMPD2Q68DX3 1309 aaPredicted RBP17.1■□□□□ 0.33
IFT140-204ENST00000439987 FAM237AA0A1B0GTK4 181 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 ZNF202O95125 648 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 PTPREP23469 700 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 GALNT17Q6IS24 598 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 SASS6Q6UVJ0 657 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
IFT140-204ENST00000439987 FBXO2Q9UK22 296 aaPredicted RBP17.09■□□□□ 0.33
IFT140-204ENST00000439987 HPSEQ9Y251 543 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 ADAMTS3O15072 1205 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 ZNF543Q08ER8 600 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 UVSSAQ2YD98 709 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 PIK3AP1Q6ZUJ8 805 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 HOMER1Q86YM7 354 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 DAGLBQ8NCG7 672 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 FAM151AQ8WW52 585 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
IFT140-204ENST00000439987 TRAPPC10P48553 1259 aa17.08■□□□□ 0.33
IFT140-204ENST00000439987 SHROOM1Q2M3G4 852 aaPredicted RBP17.08■□□□□ 0.33
IFT140-204ENST00000439987 TMEM179Q6ZVK1 233 aa17.08■□□□□ 0.33
IFT140-204ENST00000439987 MKL1Q969V6 931 aa17.08■□□□□ 0.33
IFT140-204ENST00000439987 PIGSQ96S52 555 aa17.08■□□□□ 0.33
IFT140-204ENST00000439987 VAT1LQ9HCJ6 419 aa17.08■□□□□ 0.33
IFT140-204ENST00000439987 NYAP2Q9P242 653 aa17.08■□□□□ 0.33
IFT140-204ENST00000439987 BMP15O95972 392 aa17.08■□□□□ 0.32
IFT140-204ENST00000439987 TTC38Q5R3I4 469 aa17.08■□□□□ 0.32
IFT140-204ENST00000439987 FKBP1CQ5VVH2 108 aa17.08■□□□□ 0.32
IFT140-204ENST00000439987 HERC5Q9UII4 1024 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms