RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 CMTR1Q8N1G2 835 aaKnown RBP8.72□□□□□ -1.01
UBR3-205ENST00000439681 SRBD1Q8N5C6 995 aaKnown RBP8.72□□□□□ -1.01
UBR3-205ENST00000439681 CTCFLQ8NI51 663 aaPredicted RBP8.72□□□□□ -1.01
UBR3-205ENST00000439681 OTUD5Q96G74 571 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 IPO9Q96P70 1041 aaKnown RBP8.72□□□□□ -1.01
UBR3-205ENST00000439681 SH2D4AQ9H788 454 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 GOPCQ9HD26 462 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 KCNH4Q9UQ05 1017 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 FRMPD2Q68DX3 1309 aaPredicted RBP8.72□□□□□ -1.01
UBR3-205ENST00000439681 KLRF2D3W0D1 207 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 PARP1P09874 1014 aaKnown RBP8.72□□□□□ -1.01
UBR3-205ENST00000439681 SLC1A4P43007 532 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 USP14P54578 494 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 MOGSQ13724 837 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 KCTD1Q719H9 257 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 NSUN7Q8NE18 718 aaKnown RBP8.72□□□□□ -1.01
UBR3-205ENST00000439681 SMARCC2Q8TAQ2 1214 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 INTS4Q96HW7 963 aaKnown RBP8.72□□□□□ -1.01
UBR3-205ENST00000439681 C12orf42Q96LP6 360 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 FEZ1Q99689 392 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 GPCPD1Q9NPB8 672 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 RBM28Q9NW13 759 aaKnown RBP8.72□□□□□ -1.01
UBR3-205ENST00000439681 TLL2Q9Y6L7 1015 aa8.72□□□□□ -1.01
UBR3-205ENST00000439681 PAPPA2Q9BXP8 1791 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 A0A0G2JLL6 359 aaPredicted RBP8.71□□□□□ -1.01
UBR3-205ENST00000439681 CCDC196A0A1B0GTZ2 297 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 TMEM88BA6NKF7 163 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 CYTH3O43739 400 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 RAD21O60216 631 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 DHX16O60231 1041 aaKnown RBP8.71□□□□□ -1.01
UBR3-205ENST00000439681 JAK2O60674 1132 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 PPFIA3O75145 1194 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 BMP3P12645 472 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 IFNAR1P17181 557 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 KIF5BP33176 963 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 HMGCS2P54868 508 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 ASPRV1Q53RT3 343 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 FAM83BQ5T0W9 1011 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 PRRT2Q7Z6L0 340 aaPredicted RBP8.71□□□□□ -1.01
UBR3-205ENST00000439681 SPRYD3Q8NCJ5 442 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 LPAR1Q92633 364 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 WNK4Q96J92 1243 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 LLPHQ9BRT6 129 aaKnown RBP8.71□□□□□ -1.01
UBR3-205ENST00000439681 UBA5Q9GZZ9 404 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 CPVLQ9H3G5 476 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 FOXD4L1Q9NU39 408 aa8.71□□□□□ -1.01
UBR3-205ENST00000439681 FDPSP14324 419 aaKnown RBP8.71□□□□□ -1.02
UBR3-205ENST00000439681 VCAM1P19320 739 aa8.71□□□□□ -1.02
UBR3-205ENST00000439681 SMARCA1P28370 1054 aa8.71□□□□□ -1.02
UBR3-205ENST00000439681 GNAQP50148 359 aa8.71□□□□□ -1.02
UBR3-205ENST00000439681 GPATCH4Q5T3I0 446 aaKnown RBP8.71□□□□□ -1.02
UBR3-205ENST00000439681 SPRYD7Q5W111 196 aa8.71□□□□□ -1.02
UBR3-205ENST00000439681 BTNL9Q6UXG8 535 aa8.71□□□□□ -1.02
UBR3-205ENST00000439681 CCDC82Q8N4S0 544 aa8.71□□□□□ -1.02
UBR3-205ENST00000439681 PHKBQ93100 1093 aa8.71□□□□□ -1.02
UBR3-205ENST00000439681 MS4A4AQ96JQ5 239 aa8.71□□□□□ -1.02
UBR3-205ENST00000439681 LZTS2Q9BRK4 669 aa8.71□□□□□ -1.02
UBR3-205ENST00000439681 PTPDC1A2A3K4 754 aa8.7□□□□□ -1.02
UBR3-205ENST00000439681 TMEM232C9JQI7 657 aa8.7□□□□□ -1.02
UBR3-205ENST00000439681 CPLX1O14810 134 aa8.7□□□□□ -1.02
UBR3-205ENST00000439681 WDR46O15213 610 aaKnown RBP8.7□□□□□ -1.02
UBR3-205ENST00000439681 SLC16A2P36021 539 aa8.7□□□□□ -1.02
UBR3-205ENST00000439681 CCDC96Q2M329 555 aa8.7□□□□□ -1.02
UBR3-205ENST00000439681 RGMBQ6NW40 437 aa8.7□□□□□ -1.02
UBR3-205ENST00000439681 RASAL3Q86YV0 1011 aa8.7□□□□□ -1.02
UBR3-205ENST00000439681 RIOX1Q9H6W3 641 aa8.7□□□□□ -1.02
UBR3-205ENST00000439681 PRPF3O43395 683 aaKnown RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 PLA2G6O60733 806 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 FMNL1O95466 1100 aaPredicted RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 ZNF157P51786 506 aaPredicted RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 TREML2Q5T2D2 321 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 GPAT2Q6NUI2 795 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 ADGRF4Q8IZF3 695 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 DDX11Q96FC9 970 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 SPZ1Q9BXG8 430 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 RPAP3Q9H6T3 665 aaPredicted RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 JMJD4Q9H9V9 463 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 FBXO28Q9NVF7 368 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 TMOD4Q9NZQ9 345 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 V9GY48 417 aaPredicted RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 hCG_1642624A0A1W2PR95 340 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 FAM155AB1AL88 458 aaPredicted RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 CDKL5O76039 1030 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 ZBTB48P10074 688 aaPredicted RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 APLP1P51693 650 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 SSRP1Q08945 709 aaKnown RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 MKRN3Q13064 507 aaKnown RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 SNAPC2Q13487 334 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 PKN1Q16512 942 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 CPLX2Q6PUV4 134 aaKnown RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 CATSPERGQ6ZRH7 1159 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 MTMR8Q96EF0 704 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 HHIPL1Q96JK4 782 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 SLC26A6Q9BXS9 759 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 VAT1LQ9HCJ6 419 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 FEM1BQ9UK73 627 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 ABT1Q9ULW3 272 aaKnown RBP8.69□□□□□ -1.02
UBR3-205ENST00000439681 SMC3Q9UQE7 1217 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms