RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ZYXQ15942 572 aaKnown RBP24.07■■□□□ 1.44
CHD3-204ENST00000439235 USP17L2Q6R6M4 530 aa24.07■■□□□ 1.44
CHD3-204ENST00000439235 CLMNQ96JQ2 1002 aa24.07■■□□□ 1.44
CHD3-204ENST00000439235 ISY1Q9ULR0 285 aaKnown RBP24.07■■□□□ 1.44
CHD3-204ENST00000439235 AFG3L2Q9Y4W6 797 aa24.07■■□□□ 1.44
CHD3-204ENST00000439235 TRIM75PA6NK02 468 aa24.06■■□□□ 1.44
CHD3-204ENST00000439235 BACE1P56817 501 aa24.06■■□□□ 1.44
CHD3-204ENST00000439235 SMARCC2Q8TAQ2 1214 aa24.06■■□□□ 1.44
CHD3-204ENST00000439235 CWC22Q9HCG8 908 aaKnown RBP24.06■■□□□ 1.44
CHD3-204ENST00000439235 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.06■■□□□ 1.44
CHD3-204ENST00000439235 KIF3AQ9Y496 699 aa24.06■■□□□ 1.44
CHD3-204ENST00000439235 FRMPD2Q68DX3 1309 aaPredicted RBP24.06■■□□□ 1.44
CHD3-204ENST00000439235 TRPM7Q96QT4 1865 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 KLRF2D3W0D1 207 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 PLEKHA8P1O95397 391 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 CTDNEP1O95476 244 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 BMP3P12645 472 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 FSTL1Q12841 308 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 PPIL2Q13356 520 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 NTRK3Q16288 839 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 CST9Q5W186 159 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 RASGRP2Q7LDG7 609 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 TRIM22Q8IYM9 498 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 STAG2Q8N3U4 1231 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 SLC10A4Q96EP9 437 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 OTUD5Q96G74 571 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 STK36Q9NRP7 1315 aa24.05■■□□□ 1.44
CHD3-204ENST00000439235 WDR46O15213 610 aaKnown RBP24.04■■□□□ 1.44
CHD3-204ENST00000439235 JAK2O60674 1132 aa24.04■■□□□ 1.44
CHD3-204ENST00000439235 GOLGA8HP0CJ92 632 aa24.04■■□□□ 1.44
CHD3-204ENST00000439235 SMARCA1P28370 1054 aa24.04■■□□□ 1.44
CHD3-204ENST00000439235 SSRP1Q08945 709 aaKnown RBP24.04■■□□□ 1.44
CHD3-204ENST00000439235 SPICE1Q8N0Z3 855 aa24.04■■□□□ 1.44
CHD3-204ENST00000439235 OPTNQ96CV9 577 aa24.04■■□□□ 1.44
CHD3-204ENST00000439235 C12orf42Q96LP6 360 aa24.04■■□□□ 1.44
CHD3-204ENST00000439235 SPZ1Q9BXG8 430 aa24.04■■□□□ 1.44
CHD3-204ENST00000439235 GPCPD1Q9NPB8 672 aa24.04■■□□□ 1.44
CHD3-204ENST00000439235 TMOD4Q9NZQ9 345 aa24.04■■□□□ 1.44
CHD3-204ENST00000439235 CXCL11O14625 94 aa24.03■■□□□ 1.44
CHD3-204ENST00000439235 FMNL1O95466 1100 aaPredicted RBP24.03■■□□□ 1.44
CHD3-204ENST00000439235 GJB2P29033 226 aa24.03■■□□□ 1.44
CHD3-204ENST00000439235 AKAP17AQ02040 695 aaKnown RBP24.03■■□□□ 1.44
CHD3-204ENST00000439235 SRBD1Q8N5C6 995 aaKnown RBP24.03■■□□□ 1.44
CHD3-204ENST00000439235 RNF26Q9BY78 433 aaPredicted RBP24.03■■□□□ 1.44
CHD3-204ENST00000439235 RBM27Q9P2N5 1060 aaKnown RBP24.03■■□□□ 1.44
CHD3-204ENST00000439235 CNTNAP5Q8WYK1 1306 aa24.03■■□□□ 1.44
CHD3-204ENST00000439235 PHIPQ8WWQ0 1821 aa24.03■■□□□ 1.44
CHD3-204ENST00000439235 FUT2Q10981 343 aa24.02■■□□□ 1.44
CHD3-204ENST00000439235 SH3D19Q5HYK7 790 aa24.02■■□□□ 1.44
CHD3-204ENST00000439235 KCTD1Q719H9 257 aa24.02■■□□□ 1.44
CHD3-204ENST00000439235 FAM184AQ8NB25 1140 aa24.02■■□□□ 1.44
CHD3-204ENST00000439235 CNKSR2Q8WXI2 1034 aa24.02■■□□□ 1.44
CHD3-204ENST00000439235 PHKBQ93100 1093 aa24.02■■□□□ 1.44
CHD3-204ENST00000439235 SLC26A6Q9BXS9 759 aa24.02■■□□□ 1.44
CHD3-204ENST00000439235 ORC3Q9UBD5 711 aaPredicted RBP24.02■■□□□ 1.44
CHD3-204ENST00000439235 HMGCS2P54868 508 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 HUNKP57058 714 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 KIAA1755Q5JYT7 1200 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 FAM83BQ5T0W9 1011 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 NBPF11Q86T75 865 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 CMTR1Q8N1G2 835 aaKnown RBP24.01■■□□□ 1.43
CHD3-204ENST00000439235 CCDC82Q8N4S0 544 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 WASF1Q92558 559 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 DDX11Q96FC9 970 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 NUP88Q99567 741 aaPredicted RBP24.01■■□□□ 1.43
CHD3-204ENST00000439235 EMILIN3Q9NT22 766 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 KCNH4Q9UQ05 1017 aa24.01■■□□□ 1.43
CHD3-204ENST00000439235 IRF6O14896 467 aa24■■□□□ 1.43
CHD3-204ENST00000439235 PRPF3O43395 683 aaKnown RBP24■■□□□ 1.43
CHD3-204ENST00000439235 VCAM1P19320 739 aa24■■□□□ 1.43
CHD3-204ENST00000439235 STAT2P52630 851 aa24■■□□□ 1.43
CHD3-204ENST00000439235 IKQ13123 557 aaPredicted RBP24■■□□□ 1.43
CHD3-204ENST00000439235 FAM160B2Q86V87 743 aa24■■□□□ 1.43
CHD3-204ENST00000439235 TMEM232C9JQI7 657 aa23.99■■□□□ 1.43
CHD3-204ENST00000439235 DEXIO95424 95 aa23.99■■□□□ 1.43
CHD3-204ENST00000439235 PDCP20941 246 aa23.99■■□□□ 1.43
CHD3-204ENST00000439235 TTBK2Q6IQ55 1244 aa23.99■■□□□ 1.43
CHD3-204ENST00000439235 CHURC1Q8WUH1 139 aa23.99■■□□□ 1.43
CHD3-204ENST00000439235 WNK4Q96J92 1243 aa23.99■■□□□ 1.43
CHD3-204ENST00000439235 UBA5Q9GZZ9 404 aa23.99■■□□□ 1.43
CHD3-204ENST00000439235 RIOX1Q9H6W3 641 aa23.99■■□□□ 1.43
CHD3-204ENST00000439235 FEM1BQ9UK73 627 aa23.99■■□□□ 1.43
CHD3-204ENST00000439235 A0A0G2JLL6 359 aaPredicted RBP23.98■■□□□ 1.43
CHD3-204ENST00000439235 PLA2G6O60733 806 aa23.98■■□□□ 1.43
CHD3-204ENST00000439235 BTNL9Q6UXG8 535 aa23.98■■□□□ 1.43
CHD3-204ENST00000439235 PRRT2Q7Z6L0 340 aaPredicted RBP23.98■■□□□ 1.43
CHD3-204ENST00000439235 PROCA1Q8NCQ7 364 aaPredicted RBP23.98■■□□□ 1.43
CHD3-204ENST00000439235 RRP36Q96EU6 259 aaKnown RBP23.98■■□□□ 1.43
CHD3-204ENST00000439235 TMEM88BA6NKF7 163 aa23.97■■□□□ 1.43
CHD3-204ENST00000439235 CYTH3O43739 400 aa23.97■■□□□ 1.43
CHD3-204ENST00000439235 PPFIA3O75145 1194 aa23.97■■□□□ 1.43
CHD3-204ENST00000439235 ZBTB48P10074 688 aaPredicted RBP23.97■■□□□ 1.43
CHD3-204ENST00000439235 FDPSP14324 419 aaKnown RBP23.97■■□□□ 1.43
CHD3-204ENST00000439235 APLP1P51693 650 aa23.97■■□□□ 1.43
CHD3-204ENST00000439235 SNAPC2Q13487 334 aa23.97■■□□□ 1.43
CHD3-204ENST00000439235 SYDE2Q5VT97 1194 aa23.97■■□□□ 1.43
CHD3-204ENST00000439235 SAPCD2Q86UD0 394 aa23.97■■□□□ 1.43
CHD3-204ENST00000439235 TANGO6Q9C0B7 1094 aa23.97■■□□□ 1.43
CHD3-204ENST00000439235 RPAP3Q9H6T3 665 aaPredicted RBP23.97■■□□□ 1.43
CHD3-204ENST00000439235 SEC63Q9UGP8 760 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms