RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 CD99L2Q8TCZ2 262 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 ARMC5Q96C12 935 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 IFT43Q96FT9 208 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 VEZTQ9HBM0 779 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 ZFYVE28Q9HCC9 887 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 SPATA31C2B4DYI2 1134 aa11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 F8W031 263 aaPredicted RBP11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 IGF2BP3O00425 579 aaKnown RBP eCLIP11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 FZD6O60353 706 aa11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 FKBP1AP62942 108 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 CHRNDQ07001 517 aa11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 DDX10Q13206 875 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 IFIT5Q13325 482 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 KIF22Q14807 665 aa11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 CWF19L2Q2TBE0 894 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 SLC9C1Q4G0N8 1177 aa11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 CLMNQ96JQ2 1002 aa11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 PLA2G12BQ9BX93 195 aa11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 FZD1Q9UP38 647 aa11.06□□□□□ -0.64
LSMEM1-202ENST00000439068 CLRN2A0PK11 232 aa11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 TTLL8A6PVC2 850 aa11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 USP2O75604 605 aaPredicted RBP11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 CSF1RP07333 972 aa11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 BRD2P25440 801 aaKnown RBP11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 TNNI2P48788 182 aa11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 GTF2A2P52657 109 aa11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 GCKRQ14397 625 aa11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 RASA3Q14644 834 aa11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 NBPF12Q5TAG4 269 aaPredicted RBP11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 C1orf53Q5VUE5 145 aa11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 C15orf52Q6ZUT6 534 aaKnown RBP11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 LYSMD3Q7Z3D4 306 aa11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 PRMT6Q96LA8 375 aaPredicted RBP11.05□□□□□ -0.64
LSMEM1-202ENST00000439068 COL4A1P02462 1669 aa11.04□□□□□ -0.64
LSMEM1-202ENST00000439068 IL1R1P14778 569 aa11.04□□□□□ -0.64
LSMEM1-202ENST00000439068 PKDCCQ504Y2 493 aa11.04□□□□□ -0.64
LSMEM1-202ENST00000439068 TAF7LQ5H9L4 462 aa11.04□□□□□ -0.64
LSMEM1-202ENST00000439068 NPAS4Q8IUM7 802 aa11.04□□□□□ -0.64
LSMEM1-202ENST00000439068 OPTNQ96CV9 577 aa11.04□□□□□ -0.64
LSMEM1-202ENST00000439068 ZFP42Q96MM3 310 aa11.04□□□□□ -0.64
LSMEM1-202ENST00000439068 CSADQ9Y600 493 aa11.04□□□□□ -0.64
LSMEM1-202ENST00000439068 TAF5LO75529 589 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 DGAT1O75907 488 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 KLRK1P26718 216 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 TAF1CQ15572 869 aaPredicted RBP11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 CCDC57Q2TAC2 916 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 ZNF280CQ8ND82 737 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 LINS1Q8NG48 757 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 RHPN1Q8TCX5 695 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 ASB16Q96NS5 453 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 ELP3Q9H9T3 547 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 BRPF3Q9ULD4 1205 aa11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 KIAA0100Q14667 2235 aaKnown RBP11.03□□□□□ -0.64
LSMEM1-202ENST00000439068 PSME4Q14997 1843 aa11.02□□□□□ -0.64
LSMEM1-202ENST00000439068 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 PLIN1O60240 522 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 FXR1P51114 621 aaKnown RBP eCLIP11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 TWISTNBQ3B726 338 aaPredicted RBP11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 LDHAL6AQ6ZMR3 332 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 CERS5Q8N5B7 392 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 TSPYL6Q8N831 410 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 DNAAF4Q8WXU2 420 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 HOOK2Q96ED9 719 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 ZNF333Q96JL9 665 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 HSH2DQ96JZ2 352 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 PTPN18Q99952 460 aa11.02□□□□□ -0.65
LSMEM1-202ENST00000439068 CCL15-CCL14A0A0B4J2E2 113 aa11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 AXIN1O15169 862 aa11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 SMCPP49901 116 aaPredicted RBP11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 PRMT2P55345 433 aa11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 TAGLNQ01995 201 aaKnown RBP11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 CCL15Q16663 113 aa11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 TMC7Q7Z402 723 aa11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 TREML1Q86YW5 311 aa11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 TIMMDC1Q9NPL8 285 aa11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 CNNM1Q9NRU3 951 aa11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 ZNF70Q9UC06 446 aaPredicted RBP11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 DACH1Q9UI36 760 aa11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 TTF2Q9UNY4 1162 aaKnown RBP11.01□□□□□ -0.65
LSMEM1-202ENST00000439068 NRG2O14511 850 aaPredicted RBP11□□□□□ -0.65
LSMEM1-202ENST00000439068 CETPP11597 493 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 ATP4AP20648 1035 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 HOXD10P28358 340 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 MSX1P28360 303 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 MFSD14BQ5SR56 506 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 ALKBH2Q6NS38 261 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 VPS37DQ86XT2 251 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 DZIP1LQ8IYY4 767 aaKnown RBP11□□□□□ -0.65
LSMEM1-202ENST00000439068 DPF3Q92784 378 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 SUSD3Q96L08 255 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 TDRD3Q9H7E2 651 aaKnown RBP11□□□□□ -0.65
LSMEM1-202ENST00000439068 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
LSMEM1-202ENST00000439068 ZDHHC3Q9NYG2 299 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 PTCH2Q9Y6C5 1203 aa11□□□□□ -0.65
LSMEM1-202ENST00000439068 TCP10L2B9ZVM9 353 aa10.99□□□□□ -0.65
LSMEM1-202ENST00000439068 SNAP23O00161 211 aa10.99□□□□□ -0.65
LSMEM1-202ENST00000439068 NDUFB5O43674 189 aa10.99□□□□□ -0.65
LSMEM1-202ENST00000439068 TLR2O60603 784 aa10.99□□□□□ -0.65
LSMEM1-202ENST00000439068 FRAT2O75474 233 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms