RNA–Protein interactions for RNA: ENST00000438886.1

APEX1-203, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-203ENST00000438886 ZNF654Q8IZM8 581 aa9.92□□□□□ -0.82
APEX1-203ENST00000438886 LRRC47Q8N1G4 583 aaKnown RBP9.92□□□□□ -0.82
APEX1-203ENST00000438886 MB21D1Q8N884 522 aa9.92□□□□□ -0.82
APEX1-203ENST00000438886 CHURC1Q8WUH1 139 aa9.92□□□□□ -0.82
APEX1-203ENST00000438886 BRI3BPQ8WY22 251 aa9.92□□□□□ -0.82
APEX1-203ENST00000438886 PARK7Q99497 189 aaKnown RBP9.92□□□□□ -0.82
APEX1-203ENST00000438886 CFHR5Q9BXR6 569 aa9.92□□□□□ -0.82
APEX1-203ENST00000438886 EMILIN3Q9NT22 766 aa9.92□□□□□ -0.82
APEX1-203ENST00000438886 FEM1BQ9UK73 627 aa9.92□□□□□ -0.82
APEX1-203ENST00000438886 PNMA2Q9UL42 364 aa9.92□□□□□ -0.82
APEX1-203ENST00000438886 SLC12A7Q9Y666 1083 aa9.92□□□□□ -0.82
APEX1-203ENST00000438886 PARP1P09874 1014 aaKnown RBP9.91□□□□□ -0.82
APEX1-203ENST00000438886 PDHBP11177 359 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 BMP3P12645 472 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 SMARCA1P28370 1054 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 GCLCP48506 637 aaPredicted RBP9.91□□□□□ -0.82
APEX1-203ENST00000438886 NEK4P51957 841 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 STAT2P52630 851 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 ZNF543Q08ER8 600 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 ZYXQ15942 572 aaKnown RBP9.91□□□□□ -0.82
APEX1-203ENST00000438886 LBX2Q6XYB7 198 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 CATSPERGQ6ZRH7 1159 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 IFNL1Q8IU54 200 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 CTCFLQ8NI51 663 aaPredicted RBP9.91□□□□□ -0.82
APEX1-203ENST00000438886 BRF1Q92994 677 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 ZNF274Q96GC6 653 aaPredicted RBP9.91□□□□□ -0.82
APEX1-203ENST00000438886 KIF2CQ99661 725 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 LZTS2Q9BRK4 669 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 UPF3BQ9BZI7 483 aaKnown RBP9.91□□□□□ -0.82
APEX1-203ENST00000438886 RPAP3Q9H6T3 665 aaPredicted RBP9.91□□□□□ -0.82
APEX1-203ENST00000438886 RBM28Q9NW13 759 aaKnown RBP9.91□□□□□ -0.82
APEX1-203ENST00000438886 SAGE1Q9NXZ1 904 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 HOXC10Q9NYD6 342 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.91□□□□□ -0.82
APEX1-203ENST00000438886 PCNTO95613 3336 aa9.91□□□□□ -0.82
APEX1-203ENST00000438886 A0A0G2JMZ2 1700 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 RLFQ13129 1914 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 BTBD19C9JJ37 291 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 PDHXO00330 501 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 ZBTB43O43298 467 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 RAD21O60216 631 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 TROAPQ12815 778 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 MKRN3Q13064 507 aaKnown RBP9.9□□□□□ -0.82
APEX1-203ENST00000438886 TRAF1Q13077 416 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 GRM1Q13255 1194 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 GRM4Q14833 912 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 CCDC96Q2M329 555 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 GPAT2Q6NUI2 795 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 BTNL9Q6UXG8 535 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 CHST3Q7LGC8 479 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 PRPF38AQ8NAV1 312 aaKnown RBP9.9□□□□□ -0.82
APEX1-203ENST00000438886 NKX2-3Q8TAU0 364 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 BEGAINQ9BUH8 593 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 TANGO6Q9C0B7 1094 aa9.9□□□□□ -0.82
APEX1-203ENST00000438886 KLF18A0A0U1RQI7 1052 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 IGF2BP3O00425 579 aaKnown RBP eCLIP9.89□□□□□ -0.83
APEX1-203ENST00000438886 DHX16O60231 1041 aaKnown RBP9.89□□□□□ -0.83
APEX1-203ENST00000438886 AOC2O75106 756 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 FLOT1O75955 427 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 TOB2Q14106 344 aaPredicted RBP9.89□□□□□ -0.83
APEX1-203ENST00000438886 COG2Q14746 738 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 TAF1CQ15572 869 aaPredicted RBP9.89□□□□□ -0.83
APEX1-203ENST00000438886 NOM1Q5C9Z4 860 aaKnown RBP9.89□□□□□ -0.83
APEX1-203ENST00000438886 FAM83BQ5T0W9 1011 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 CPLX2Q6PUV4 134 aaKnown RBP9.89□□□□□ -0.83
APEX1-203ENST00000438886 SPICE1Q8N0Z3 855 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 DNAJC5GQ8N7S2 189 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 ZSCAN31Q96LW9 406 aaPredicted RBP9.89□□□□□ -0.83
APEX1-203ENST00000438886 TCEANC2Q96MN5 208 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 SLF1Q9BQI6 1058 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 LRRC2Q9BYS8 371 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 ASCC2Q9H1I8 757 aaPredicted RBP9.89□□□□□ -0.83
APEX1-203ENST00000438886 ZFYVE28Q9HCC9 887 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 SH2B1Q9NRF2 756 aaPredicted RBP9.89□□□□□ -0.83
APEX1-203ENST00000438886 RBM27Q9P2N5 1060 aaKnown RBP9.89□□□□□ -0.83
APEX1-203ENST00000438886 PPP1R9AQ9ULJ8 1098 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 LIMCH1Q9UPQ0 1083 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 MYH6P13533 1939 aa9.89□□□□□ -0.83
APEX1-203ENST00000438886 PALM3A6NDB9 673 aaPredicted RBP9.88□□□□□ -0.83
APEX1-203ENST00000438886 GOLGA8AA7E2F4 631 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 GOLGA8BA8MQT2 603 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 TMEM232C9JQI7 657 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 CPA1P15085 419 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 DSG3P32926 999 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 COPB2P35606 906 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 METAP2P50579 478 aaKnown RBP eCLIP9.88□□□□□ -0.83
APEX1-203ENST00000438886 OAZ1P54368 228 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 AK2P54819 239 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 HERVK_113P62684 666 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 HTRA3P83110 453 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 APOBRQ0VD83 1088 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 IKQ13123 557 aaPredicted RBP9.88□□□□□ -0.83
APEX1-203ENST00000438886 RTN1Q16799 776 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 TREML2Q5T2D2 321 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 SYDE2Q5VT97 1194 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 MICU3Q86XE3 530 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 FAM43AQ8N2R8 423 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 JMYQ8N9B5 988 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 FANCBQ8NB91 859 aa9.88□□□□□ -0.83
APEX1-203ENST00000438886 SMCR8Q8TEV9 937 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms