RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 HOXA7P31268 230 aaPredicted RBP21.47■■□□□ 1.03
HDAC6-208ENST00000438518 GNAQP50148 359 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 ZNF543Q08ER8 600 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 APOBRQ0VD83 1088 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 MOGSQ13724 837 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 GRM4Q14833 912 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 OTUD7BQ6GQQ9 843 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 GADL1Q6ZQY3 521 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 ANKRD23Q86SG2 305 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 PNMA3Q9UL41 463 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 WDR33Q9C0J8 1336 aaKnown RBP21.47■■□□□ 1.03
HDAC6-208ENST00000438518 USP17L15C9J2P7 530 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 USP17L13C9JLJ4 530 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 USP17L11C9JVI0 530 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 USP17L18D6R9N7 530 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 USP17L22D6RA61 530 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 USP17L17D6RBQ6 530 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 USP17L19D6RCP7 530 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 USP17L20D6RJB6 530 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 RAD21O60216 631 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 USP17L24Q0WX57 530 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 MKRN3Q13064 507 aaKnown RBP21.46■■□□□ 1.03
HDAC6-208ENST00000438518 FAM160B2Q86V87 743 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 NUP133Q8WUM0 1156 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 ZSCAN31Q96LW9 406 aaPredicted RBP21.46■■□□□ 1.03
HDAC6-208ENST00000438518 LZTS2Q9BRK4 669 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 BRPF3Q9ULD4 1205 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 LIMCH1Q9UPQ0 1083 aa21.46■■□□□ 1.03
HDAC6-208ENST00000438518 GOLGA8BA8MQT2 603 aa21.45■■□□□ 1.02
HDAC6-208ENST00000438518 TM4SF4P48230 202 aa21.45■■□□□ 1.02
HDAC6-208ENST00000438518 METAP2P50579 478 aaKnown RBP eCLIP21.45■■□□□ 1.02
HDAC6-208ENST00000438518 CCDC96Q2M329 555 aa21.45■■□□□ 1.02
HDAC6-208ENST00000438518 MICU3Q86XE3 530 aa21.45■■□□□ 1.02
HDAC6-208ENST00000438518 SPICE1Q8N0Z3 855 aa21.45■■□□□ 1.02
HDAC6-208ENST00000438518 FANCBQ8NB91 859 aa21.45■■□□□ 1.02
HDAC6-208ENST00000438518 CHURC1Q8WUH1 139 aa21.45■■□□□ 1.02
HDAC6-208ENST00000438518 BRI3BPQ8WY22 251 aa21.45■■□□□ 1.02
HDAC6-208ENST00000438518 RPAP3Q9H6T3 665 aaPredicted RBP21.45■■□□□ 1.02
HDAC6-208ENST00000438518 SH2B1Q9NRF2 756 aaPredicted RBP21.45■■□□□ 1.02
HDAC6-208ENST00000438518 FEM1BQ9UK73 627 aa21.45■■□□□ 1.02
HDAC6-208ENST00000438518 PALM3A6NDB9 673 aaPredicted RBP21.44■■□□□ 1.02
HDAC6-208ENST00000438518 GOLGA8AA7E2F4 631 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 ALDH1A1P00352 501 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 FDX1P10109 184 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 OSBPP22059 807 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 SMARCA1P28370 1054 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 PDIA3P30101 505 aaKnown RBP21.44■■□□□ 1.02
HDAC6-208ENST00000438518 STAT2P52630 851 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 KIAA1755Q5JYT7 1200 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 FAM83BQ5T0W9 1011 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 GPAT2Q6NUI2 795 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 CATSPERGQ6ZRH7 1159 aa21.44■■□□□ 1.02
HDAC6-208ENST00000438518 DHX16O60231 1041 aaKnown RBP21.43■■□□□ 1.02
HDAC6-208ENST00000438518 VEGFBP49765 207 aa21.43■■□□□ 1.02
HDAC6-208ENST00000438518 KIF23Q02241 960 aaPredicted RBP21.43■■□□□ 1.02
HDAC6-208ENST00000438518 GRM1Q13255 1194 aa21.43■■□□□ 1.02
HDAC6-208ENST00000438518 RTN1Q16799 776 aa21.43■■□□□ 1.02
HDAC6-208ENST00000438518 BTNL9Q6UXG8 535 aa21.43■■□□□ 1.02
HDAC6-208ENST00000438518 GTF3C2Q8WUA4 911 aaPredicted RBP21.43■■□□□ 1.02
HDAC6-208ENST00000438518 SNX21Q969T3 373 aa21.43■■□□□ 1.02
HDAC6-208ENST00000438518 TANGO6Q9C0B7 1094 aa21.43■■□□□ 1.02
HDAC6-208ENST00000438518 MAD2L2Q9UI95 211 aa21.43■■□□□ 1.02
HDAC6-208ENST00000438518 TPCN1Q9ULQ1 816 aa21.43■■□□□ 1.02
HDAC6-208ENST00000438518 NAP1L2Q9ULW6 460 aaPredicted RBP21.43■■□□□ 1.02
HDAC6-208ENST00000438518 MTMR7Q9Y216 660 aa21.43■■□□□ 1.02
HDAC6-208ENST00000438518 A0A0G2JMZ2 1700 aa21.42■■□□□ 1.02
HDAC6-208ENST00000438518 BTBD19C9JJ37 291 aa21.42■■□□□ 1.02
HDAC6-208ENST00000438518 RLFQ13129 1914 aa21.42■■□□□ 1.02
HDAC6-208ENST00000438518 DGKZQ13574 1117 aa21.42■■□□□ 1.02
HDAC6-208ENST00000438518 TREML2Q5T2D2 321 aa21.42■■□□□ 1.02
HDAC6-208ENST00000438518 MYL10Q9BUA6 226 aa21.42■■□□□ 1.02
HDAC6-208ENST00000438518 SLKQ9H2G2 1235 aaPredicted RBP21.42■■□□□ 1.02
HDAC6-208ENST00000438518 HOXC10Q9NYD6 342 aa21.42■■□□□ 1.02
HDAC6-208ENST00000438518 PFKFB2O60825 505 aa21.41■■□□□ 1.02
HDAC6-208ENST00000438518 IRX3P78415 501 aaPredicted RBP21.41■■□□□ 1.02
HDAC6-208ENST00000438518 COG2Q14746 738 aa21.41■■□□□ 1.02
HDAC6-208ENST00000438518 CPLX2Q6PUV4 134 aaKnown RBP21.41■■□□□ 1.02
HDAC6-208ENST00000438518 LBX2Q6XYB7 198 aa21.41■■□□□ 1.02
HDAC6-208ENST00000438518 KCTD1Q719H9 257 aa21.41■■□□□ 1.02
HDAC6-208ENST00000438518 IFNL1Q8IU54 200 aa21.41■■□□□ 1.02
HDAC6-208ENST00000438518 PRPF38AQ8NAV1 312 aaKnown RBP21.41■■□□□ 1.02
HDAC6-208ENST00000438518 PARK7Q99497 189 aaKnown RBP21.41■■□□□ 1.02
HDAC6-208ENST00000438518 NUP88Q99567 741 aaPredicted RBP21.41■■□□□ 1.02
HDAC6-208ENST00000438518 SLF1Q9BQI6 1058 aa21.41■■□□□ 1.02
HDAC6-208ENST00000438518 ISY1Q9ULR0 285 aaKnown RBP21.41■■□□□ 1.02
HDAC6-208ENST00000438518 HPS5Q9UPZ3 1129 aa21.41■■□□□ 1.02
HDAC6-208ENST00000438518 TMEM232C9JQI7 657 aa21.4■■□□□ 1.02
HDAC6-208ENST00000438518 KLRF2D3W0D1 207 aa21.4■■□□□ 1.02
HDAC6-208ENST00000438518 PDHXO00330 501 aa21.4■■□□□ 1.02
HDAC6-208ENST00000438518 FLOT1O75955 427 aa21.4■■□□□ 1.02
HDAC6-208ENST00000438518 HTRA3P83110 453 aa21.4■■□□□ 1.02
HDAC6-208ENST00000438518 PTPN18Q99952 460 aa21.4■■□□□ 1.02
HDAC6-208ENST00000438518 SPZ1Q9BXG8 430 aa21.4■■□□□ 1.02
HDAC6-208ENST00000438518 PPP1R9AQ9ULJ8 1098 aa21.4■■□□□ 1.02
HDAC6-208ENST00000438518 FRMPD2Q68DX3 1309 aaPredicted RBP21.39■■□□□ 1.01
HDAC6-208ENST00000438518 AOC2O75106 756 aa21.39■■□□□ 1.01
HDAC6-208ENST00000438518 CDKL5O76039 1030 aa21.39■■□□□ 1.01
HDAC6-208ENST00000438518 RXRAP19793 462 aa21.39■■□□□ 1.01
HDAC6-208ENST00000438518 IKQ13123 557 aaPredicted RBP21.39■■□□□ 1.01
HDAC6-208ENST00000438518 ME3Q16798 604 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms