RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 ADD1P35611 737 aaKnown RBP11.33□□□□□ -0.6
CUBN-204ENST00000438254 METAP2P50579 478 aaKnown RBP eCLIP11.33□□□□□ -0.6
CUBN-204ENST00000438254 CCT2P78371 535 aaKnown RBP11.33□□□□□ -0.6
CUBN-204ENST00000438254 PPP2R5BQ15173 497 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 EAPPQ56P03 285 aaPredicted RBP11.33□□□□□ -0.6
CUBN-204ENST00000438254 PPP4R3BQ5MIZ7 849 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 NOL9Q5SY16 702 aaKnown RBP11.33□□□□□ -0.6
CUBN-204ENST00000438254 CDC37L1Q7L3B6 337 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 CATIPQ7Z7H3 387 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 USP48Q86UV5 1035 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 MICU3Q86XE3 530 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 RAB11FIP4Q86YS3 637 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 CDCA5Q96FF9 252 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 GLIS2Q9BZE0 524 aaPredicted RBP11.33□□□□□ -0.6
CUBN-204ENST00000438254 KAT14Q9H8E8 782 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 HCSTQ9UBK5 93 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 OTOFQ9HC10 1997 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 MYH4Q9Y623 1939 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 PHIPQ8WWQ0 1821 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 PALM3A6NDB9 673 aaPredicted RBP11.32□□□□□ -0.6
CUBN-204ENST00000438254 GOLGA8AA7E2F4 631 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 MPHOSPH10O00566 681 aaKnown RBP11.32□□□□□ -0.6
CUBN-204ENST00000438254 JAK2O60674 1132 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 ASNSP08243 561 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
CUBN-204ENST00000438254 IFNAR1P17181 557 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 ICA1Q05084 483 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 GRM4Q14833 912 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 RTN1Q16799 776 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 SLC35G1Q2M3R5 365 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 NBPF11Q86T75 865 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 SCYL3Q8IZE3 742 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 CWC22Q9HCG8 908 aaKnown RBP11.32□□□□□ -0.6
CUBN-204ENST00000438254 CABP5Q9NP86 173 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.32□□□□□ -0.6
CUBN-204ENST00000438254 CLIP2Q9UDT6 1046 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 MAD2L2Q9UI95 211 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 FZD1Q9UP38 647 aa11.32□□□□□ -0.6
CUBN-204ENST00000438254 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.32□□□□□ -0.6
CUBN-204ENST00000438254 DTNBO60941 627 aa11.31□□□□□ -0.6
CUBN-204ENST00000438254 PDHBP11177 359 aa11.31□□□□□ -0.6
CUBN-204ENST00000438254 MAP1SQ66K74 1059 aaPredicted RBP11.31□□□□□ -0.6
CUBN-204ENST00000438254 SYNE3Q6ZMZ3 975 aa11.31□□□□□ -0.6
CUBN-204ENST00000438254 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.31□□□□□ -0.6
CUBN-204ENST00000438254 TMTC3Q6ZXV5 915 aa11.31□□□□□ -0.6
CUBN-204ENST00000438254 RASGRP2Q7LDG7 609 aa11.31□□□□□ -0.6
CUBN-204ENST00000438254 LRRC47Q8N1G4 583 aaKnown RBP11.31□□□□□ -0.6
CUBN-204ENST00000438254 SPRYD3Q8NCJ5 442 aa11.31□□□□□ -0.6
CUBN-204ENST00000438254 GMCL1P1Q8NEA9 526 aa11.31□□□□□ -0.6
CUBN-204ENST00000438254 CHMP4CQ96CF2 233 aa11.31□□□□□ -0.6
CUBN-204ENST00000438254 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
CUBN-204ENST00000438254 TMX2Q9Y320 296 aa11.31□□□□□ -0.6
CUBN-204ENST00000438254 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 DHX16O60231 1041 aaKnown RBP11.3□□□□□ -0.6
CUBN-204ENST00000438254 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
CUBN-204ENST00000438254 PTPRAP18433 802 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 ECE1P42892 770 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 RAB3GAP1Q15042 981 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 KIAA1755Q5JYT7 1200 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 ACER1Q8TDN7 264 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 ZKSCAN4Q969J2 545 aaPredicted RBP11.3□□□□□ -0.6
CUBN-204ENST00000438254 WRNIP1Q96S55 665 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 WDR18Q9BV38 432 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 SNCAIPQ9Y6H5 919 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 CNTNAP5Q8WYK1 1306 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 STK36Q9NRP7 1315 aa11.3□□□□□ -0.6
CUBN-204ENST00000438254 CCDC196A0A1B0GTZ2 297 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 USP17L5A8MUK1 530 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 TRAF5O00463 557 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 ARHGAP33O14559 1287 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 CYTH3O43739 400 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 SMARCA1P28370 1054 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 GJB2P29033 226 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 HMGN5P82970 282 aaKnown RBP11.29□□□□□ -0.6
CUBN-204ENST00000438254 LDLRAD1Q5T700 205 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 CCDC84Q86UT8 332 aaPredicted RBP11.29□□□□□ -0.6
CUBN-204ENST00000438254 SRBD1Q8N5C6 995 aaKnown RBP11.29□□□□□ -0.6
CUBN-204ENST00000438254 CTCFLQ8NI51 663 aaPredicted RBP11.29□□□□□ -0.6
CUBN-204ENST00000438254 GMCL1Q96IK5 515 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 PLA2G2EQ9NZK7 142 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 DAXXQ9UER7 740 aaPredicted RBP11.29□□□□□ -0.6
CUBN-204ENST00000438254 NAP1L2Q9ULW6 460 aaPredicted RBP11.29□□□□□ -0.6
CUBN-204ENST00000438254 SMC3Q9UQE7 1217 aa11.29□□□□□ -0.6
CUBN-204ENST00000438254 F5H6K3 240 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 UBE2Q2LH0YL09 131 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 PPP1R12BO60237 982 aaPredicted RBP11.28□□□□□ -0.6
CUBN-204ENST00000438254 CDKL5O76039 1030 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
CUBN-204ENST00000438254 NDUFB10O96000 172 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
CUBN-204ENST00000438254 KIF5BP33176 963 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 FMR1Q06787 632 aaKnown RBP eCLIP11.28□□□□□ -0.6
CUBN-204ENST00000438254 KLRC3Q07444 240 aa11.28□□□□□ -0.6
CUBN-204ENST00000438254 ZNF543Q08ER8 600 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms