RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ZNF236Q9UL36 1845 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 APBB1O00213 710 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 STRNO43815 780 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 ERCC3P19447 782 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 ACLYP53396 1101 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 TIMM10P62072 90 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 PSRC1Q6PGN9 363 aaPredicted RBP15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 CCDC174Q6PII3 467 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 MAPKAPK5Q8IW41 473 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 CRACR2BQ8N4Y2 399 aaPredicted RBP15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 TMEM199Q8N511 208 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 ACER1Q8TDN7 264 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 FBXL18Q96ME1 805 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 UIMC1Q96RL1 719 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 FEZ1Q99689 392 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 USP44Q9H0E7 712 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 PALD1Q9ULE6 856 aa15.22■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 PDS5AQ29RF7 1337 aaKnown RBP15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 ADAMTS4O75173 837 aa15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 MAP4K4O95819 1239 aaPredicted RBP15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 IRX5P78411 483 aaPredicted RBP15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 TMEM132AQ24JP5 1023 aa15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 PI16Q6UXB8 463 aa15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 OTOP2Q7RTS6 562 aa15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 FOXP4Q8IVH2 680 aaPredicted RBP15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 DHX36Q9H2U1 1008 aaKnown RBP15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 RPAP3Q9H6T3 665 aaPredicted RBP15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 CERS4Q9HA82 394 aa15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 GINM1Q9NU53 330 aa15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 COG5Q9UP83 839 aa15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
SMAD9-IT1-201ENST00000437983 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 EPOPA6NHQ4 379 aa15.2■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 LDHCP07864 332 aa15.2■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 CYP2C18P33260 490 aa15.2■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 CDK7P50613 346 aa15.2■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 TGFBRAP1Q8WUH2 860 aa15.2■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 TRIM34Q9BYJ4 488 aa15.2■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 SPATC1LQ9H0A9 340 aa15.2■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 IL23AQ9NPF7 189 aa15.2■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 MYADML2A6NDP7 307 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 CIAO1O76071 339 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 FGBP02675 491 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 POU3F3P20264 500 aaPredicted RBP15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 GSTO1P78417 241 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 KCNA10Q16322 511 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 ANKS1AQ92625 1134 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 HLA-CQ95604 372 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 CDCA7LQ96GN5 454 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 PHOX2BQ99453 314 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 TSEN34Q9BSV6 310 aaKnown RBP15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 RAI14Q9P0K7 980 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 SAP30BPQ9UHR5 308 aaKnown RBP15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 PA2G4Q9UQ80 394 aaKnown RBP15.19■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 ZNF865P0CJ78 1059 aaPredicted RBP15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 MFSD10Q14728 455 aa15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 CCSAPQ6IQ19 270 aaPredicted RBP15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 KLHDC9Q8NEP7 349 aa15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 NUP133Q8WUM0 1156 aa15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 LARP6Q9BRS8 491 aaKnown RBP15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 KIAA1683Q9H0B3 1180 aa15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 AATFQ9NY61 560 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 SLC5A4Q9NY91 659 aa15.18■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 FLT1P17948 1338 aa15.17■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 SYNRGQ9UMZ2 1314 aa15.17■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 PGK2P07205 417 aa15.17■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 NCAPG2Q86XI2 1143 aa15.17■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 SHCBP1Q8NEM2 672 aa15.17■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 XAGE2Q96GT9 111 aa15.17■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 PDE4AP27815 886 aa15.16■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 USP14P54578 494 aa15.16■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 PLS1Q14651 629 aa15.16■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 FAM126BQ8IXS8 530 aa15.16■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 TINF2Q9BSI4 451 aa15.16■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 SALL2Q9Y467 1007 aaPredicted RBP15.16■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 PCDHA11Q9Y5I1 949 aa15.16■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 USP34Q70CQ2 3546 aa15.16■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 BRWD1Q9NSI6 2320 aa15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 MOXD2PA6NHM9 499 aa15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 ARHGEF15O94989 841 aa15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 AKR1A1P14550 325 aa15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 IL15P40933 162 aaPredicted RBP15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 COG2Q14746 738 aa15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 ADGRA1Q86SQ6 560 aa15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 ABRAQ8N0Z2 381 aa15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 SPATA5Q8NB90 893 aa15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 MTIF3Q9H2K0 278 aaKnown RBP15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 NRBP1Q9UHY1 535 aa15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.15■□□□□ 0.02
SMAD9-IT1-201ENST00000437983 A0A1B0GUL7 405 aa15.14■□□□□ 0.01
SMAD9-IT1-201ENST00000437983 ARVCFO00192 962 aa15.14■□□□□ 0.01
SMAD9-IT1-201ENST00000437983 CA3P07451 260 aa15.14■□□□□ 0.01
SMAD9-IT1-201ENST00000437983 CCL23P55773 120 aa15.14■□□□□ 0.01
SMAD9-IT1-201ENST00000437983 TATDN1Q6P1N9 297 aa15.14■□□□□ 0.01
SMAD9-IT1-201ENST00000437983 GJD3Q8N144 294 aa15.14■□□□□ 0.01
SMAD9-IT1-201ENST00000437983 VTI1AQ96AJ9 217 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms