RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
PTCH1-209ENST00000437951 UIMC1Q96RL1 719 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 STOML1Q9UBI4 398 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 SPAG7O75391 227 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 APOA1P02647 267 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 RNASE9P60153 205 aaKnown RBP12.63□□□□□ -0.39
PTCH1-209ENST00000437951 ATG16L1Q676U5 607 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 NFE2L3Q9Y4A8 694 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 POLR2DO15514 142 aaKnown RBP12.63□□□□□ -0.39
PTCH1-209ENST00000437951 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 RASSF10A6NK89 507 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 ESRRBO95718 433 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 RNF34Q969K3 372 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 SLF1Q9BQI6 1058 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 MID2Q9UJV3 735 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 CDC23Q9UJX2 597 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 STAMBPL1Q96FJ0 436 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 IFT122Q9HBG6 1241 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 MAGEB6P1A0A0J9YX57 407 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 HNRNPCL2B2RXH8 293 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 EXOC5O00471 708 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 HNRNPCL1O60812 293 aaKnown RBP12.62□□□□□ -0.39
PTCH1-209ENST00000437951 RBM6P78332 1123 aaKnown RBP12.62□□□□□ -0.39
PTCH1-209ENST00000437951 HADHQ16836 314 aaKnown RBP12.62□□□□□ -0.39
PTCH1-209ENST00000437951 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-209ENST00000437951 KDM3AQ9Y4C1 1321 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 SNX1Q13596 522 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 TEX9Q8N6V9 391 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 CATSPER1Q8NEC5 780 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 CEP70Q8NHQ1 597 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 ZBTB24O43167 697 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-209ENST00000437951 KDM1AO60341 852 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 HSPA6P17066 643 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 C10orf76Q5T2E6 689 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 FAM186BQ8IYM0 893 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 CCDC85AQ96PX6 553 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-209ENST00000437951 SCAF11Q99590 1463 aaKnown RBP12.62□□□□□ -0.39
PTCH1-209ENST00000437951 F6X3S4 739 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 KCNK3O14649 394 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 CNPY4Q8N129 248 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 ZNF215Q9UL58 517 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-209ENST00000437951 DCTPP1Q9H773 170 aa12.62□□□□□ -0.39
PTCH1-209ENST00000437951 CFAP73A6NFT4 308 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 DRP2Q13474 957 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 RINT1Q6NUQ1 792 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 RNF207Q6ZRF8 634 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 HNRNPCP07910 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTCH1-209ENST00000437951 INHBAP08476 426 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 RFC4P35249 363 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 STAT1P42224 750 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 GIPC2Q8TF65 315 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 DBNLQ9UJU6 430 aaKnown RBP12.61□□□□□ -0.39
PTCH1-209ENST00000437951 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 S100BP04271 92 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-209ENST00000437951 SERPINB2P05120 415 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 E2F5Q15329 346 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 NBPF20Q3BBV1 942 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 EP400NLQ6ZTU2 488 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 FBXO18Q8NFZ0 1043 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 CYP7A1P22680 504 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 IBTKQ9P2D0 1353 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-209ENST00000437951 ITSN2Q9NZM3 1697 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 SSH2Q76I76 1423 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 GPC4O75487 556 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 CALR3Q96L12 384 aaKnown RBP12.61□□□□□ -0.39
PTCH1-209ENST00000437951 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 FAM133BQ5BKY9 247 aaKnown RBP12.61□□□□□ -0.39
PTCH1-209ENST00000437951 BEND3Q5T5X7 828 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 TMEM60Q9H2L4 133 aa12.61□□□□□ -0.39
PTCH1-209ENST00000437951 MCF2LO15068 1137 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 SCYL1Q96KG9 808 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 FGD4Q96M96 766 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 ARHGAP26Q9UNA1 814 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 KRT75O95678 551 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 PARP1P09874 1014 aaKnown RBP12.6□□□□□ -0.39
PTCH1-209ENST00000437951 SESTD1Q86VW0 696 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 NT5C3AQ9H0P0 336 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 CUL1Q13616 776 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 ANKRD2Q9GZV1 360 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 RANBP1P43487 201 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 TYW1BQ6NUM6 668 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 C2CD5Q86YS7 1000 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 CARD10Q9BWT7 1032 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 MAP3K10Q02779 954 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 PHKBQ93100 1093 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 TRIM11Q96F44 468 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 TEX12Q9BXU0 123 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 GSTA4O15217 222 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 ARHGDIAP52565 204 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 MRPL28Q13084 256 aaKnown RBP12.6□□□□□ -0.39
PTCH1-209ENST00000437951 TRAIPQ9BWF2 469 aa12.6□□□□□ -0.39
PTCH1-209ENST00000437951 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
PTCH1-209ENST00000437951 TRPA1O75762 1119 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 ART3Q13508 389 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 ZC3H18Q86VM9 953 aaKnown RBP12.59□□□□□ -0.39
PTCH1-209ENST00000437951 MAGEF1Q9HAY2 307 aa12.59□□□□□ -0.39
PTCH1-209ENST00000437951 KIF14Q15058 1648 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms