RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TRPC6Q9Y210 931 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 FAM102BQ5T8I3 360 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 FAM160B1Q5W0V3 765 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 B4GALNT4Q76KP1 1039 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 MYL10Q9BUA6 226 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 ZNF804BA4D1E1 1349 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 UTP14CQ5TAP6 766 aaKnown RBP17.53■□□□□ 0.4
PTPN13-204ENST00000436978 SULF1Q8IWU6 871 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 GSDMBQ8TAX9 411 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPN13-204ENST00000436978 LAD1O00515 517 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 ZEB2O60315 1214 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 ZNF75DP51815 510 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 GADL1Q6ZQY3 521 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 GPBP1Q86WP2 473 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 KLHL30Q0D2K2 578 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 NOSTRINQ8IVI9 506 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 ERO1AQ96HE7 468 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 SND1Q7KZF4 910 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPN13-204ENST00000436978 SSH3Q8TE77 659 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 TEKT3Q9BXF9 490 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 MTMR3Q13615 1198 aa17.52■□□□□ 0.4
PTPN13-204ENST00000436978 IPO4Q8TEX9 1081 aaKnown RBP17.52■□□□□ 0.4
PTPN13-204ENST00000436978 TESPA1A2RU30 521 aaPredicted RBP17.52■□□□□ 0.4
PTPN13-204ENST00000436978 ARHGAP6O43182 974 aa17.52■□□□□ 0.4
PTPN13-204ENST00000436978 TNNC2P02585 160 aa17.52■□□□□ 0.4
PTPN13-204ENST00000436978 DYMQ7RTS9 669 aa17.52■□□□□ 0.4
PTPN13-204ENST00000436978 KDM6BO15054 1643 aa17.52■□□□□ 0.4
PTPN13-204ENST00000436978 TLDC2A0PJX2 215 aa17.52■□□□□ 0.4
PTPN13-204ENST00000436978 GLI2P10070 1586 aa17.52■□□□□ 0.4
PTPN13-204ENST00000436978 RTEL1Q9NZ71 1219 aa17.52■□□□□ 0.4
PTPN13-204ENST00000436978 KCNJ14Q9UNX9 436 aa17.52■□□□□ 0.4
PTPN13-204ENST00000436978 TMOD1P28289 359 aa17.52■□□□□ 0.39
PTPN13-204ENST00000436978 ARHGEF6Q15052 776 aa17.52■□□□□ 0.39
PTPN13-204ENST00000436978 RAB17Q9H0T7 212 aa17.52■□□□□ 0.39
PTPN13-204ENST00000436978 USP6P35125 1406 aa17.52■□□□□ 0.39
PTPN13-204ENST00000436978 HAUS1Q96CS2 278 aa17.52■□□□□ 0.39
PTPN13-204ENST00000436978 YARSP54577 528 aaKnown RBP17.52■□□□□ 0.39
PTPN13-204ENST00000436978 FAM196AQ6ZSG2 479 aa17.52■□□□□ 0.39
PTPN13-204ENST00000436978 EVCP57679 992 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 CHRNDQ07001 517 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 PPP2R5EQ16537 467 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 OTUD7BQ6GQQ9 843 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 PKNOX2Q96KN3 472 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 PCDHA12Q9UN75 941 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
PTPN13-204ENST00000436978 ADALQ6DHV7 355 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 FBXO11Q86XK2 927 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 ADPGKQ9BRR6 497 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
PTPN13-204ENST00000436978 PDE6AP16499 860 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 IL6STP40189 918 aaPredicted RBP17.51■□□□□ 0.39
PTPN13-204ENST00000436978 BTDP43251 543 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 LIG4P49917 911 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 CRKLP46109 303 aaKnown RBP17.51■□□□□ 0.39
PTPN13-204ENST00000436978 ATP2A3Q93084 1043 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 ICA1Q05084 483 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 PRKG1Q13976 671 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 RUFY4Q6ZNE9 571 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 PEX26Q7Z412 305 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 NEK8Q86SG6 692 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 ASPRV1Q53RT3 343 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 EXOC8Q8IYI6 725 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 STMN2Q93045 179 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 LOC102724428A0A0B4J2F2 783 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 USP17L12C9JPN9 530 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 USP17L21D6R901 530 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 ZBTB24O43167 697 aaPredicted RBP17.51■□□□□ 0.39
PTPN13-204ENST00000436978 SIK1P57059 783 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 PANK4Q9NVE7 773 aa17.51■□□□□ 0.39
PTPN13-204ENST00000436978 LACTBP83111 547 aaPredicted RBP17.5■□□□□ 0.39
PTPN13-204ENST00000436978 MAP7Q14244 749 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 GPR162Q16538 588 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 MYOCDQ8IZQ8 938 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 CBX8Q9HC52 389 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 ARAP3Q8WWN8 1544 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 PNMA1Q8ND90 353 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 AFAP1L1Q8TED9 768 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 ASIC3Q9UHC3 531 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 BCS1LQ9Y276 419 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 WDR17Q8IZU2 1322 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 I3L4J1 428 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 ABCB5Q2M3G0 1257 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 SCG2P13521 617 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 TRIML1Q8N9V2 468 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 OR52Z1P0C646 297 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 PRR16Q569H4 304 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 IFIH1Q9BYX4 1025 aaKnown RBP17.5■□□□□ 0.39
PTPN13-204ENST00000436978 NFE2L3Q9Y4A8 694 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 TRIM37O94972 964 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 NCAPD2Q15021 1401 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 RNF123Q5XPI4 1314 aa17.5■□□□□ 0.39
PTPN13-204ENST00000436978 STAM2O75886 525 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 RPS6KA1Q15418 735 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 SARNPP82979 210 aaKnown RBP17.49■□□□□ 0.39
PTPN13-204ENST00000436978 ATP11AP98196 1134 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 RPGRIP1Q96KN7 1286 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 MED10Q9BTT4 135 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 RFX1P22670 979 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 USP14P54578 494 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms