RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 PDE6AP16499 860 aa17.94■□□□□ 0.46
HDAC8-213ENST00000436675 TMEM179Q6ZVK1 233 aa17.94■□□□□ 0.46
HDAC8-213ENST00000436675 RNF180Q86T96 592 aa17.94■□□□□ 0.46
HDAC8-213ENST00000436675 SIAH1Q8IUQ4 282 aa17.94■□□□□ 0.46
HDAC8-213ENST00000436675 ABRAQ8N0Z2 381 aa17.94■□□□□ 0.46
HDAC8-213ENST00000436675 LCORLQ8N3X6 602 aa17.94■□□□□ 0.46
HDAC8-213ENST00000436675 SYMPKQ92797 1274 aaKnown RBP17.94■□□□□ 0.46
HDAC8-213ENST00000436675 ARHGEF10LQ9HCE6 1279 aa17.94■□□□□ 0.46
HDAC8-213ENST00000436675 TMEM39AQ9NV64 488 aa17.94■□□□□ 0.46
HDAC8-213ENST00000436675 KIAA0355O15063 1070 aa17.93■□□□□ 0.46
HDAC8-213ENST00000436675 ICA1Q05084 483 aa17.93■□□□□ 0.46
HDAC8-213ENST00000436675 FPGSQ05932 587 aa17.93■□□□□ 0.46
HDAC8-213ENST00000436675 ITPRIPQ8IWB1 547 aa17.93■□□□□ 0.46
HDAC8-213ENST00000436675 PPM1EQ8WY54 764 aa17.93■□□□□ 0.46
HDAC8-213ENST00000436675 TINF2Q9BSI4 451 aa17.93■□□□□ 0.46
HDAC8-213ENST00000436675 IL1RAPL2Q9NP60 686 aa17.93■□□□□ 0.46
HDAC8-213ENST00000436675 DCP1AQ9NPI6 582 aaPredicted RBP17.93■□□□□ 0.46
HDAC8-213ENST00000436675 FBXO28Q9NVF7 368 aa17.93■□□□□ 0.46
HDAC8-213ENST00000436675 ZNF532Q9HCE3 1301 aa17.93■□□□□ 0.46
HDAC8-213ENST00000436675 SMIM22K7EJ46 135 aa17.92■□□□□ 0.46
HDAC8-213ENST00000436675 RAD21O60216 631 aa17.92■□□□□ 0.46
HDAC8-213ENST00000436675 DNAJB2P25686 324 aa17.92■□□□□ 0.46
HDAC8-213ENST00000436675 FTSJ3Q8IY81 847 aaKnown RBP17.92■□□□□ 0.46
HDAC8-213ENST00000436675 DNAJC2Q99543 621 aaKnown RBP17.92■□□□□ 0.46
HDAC8-213ENST00000436675 VCPKMTQ9H867 229 aa17.92■□□□□ 0.46
HDAC8-213ENST00000436675 ARMT1Q9H993 441 aa17.92■□□□□ 0.46
HDAC8-213ENST00000436675 TMX2Q9Y320 296 aa17.92■□□□□ 0.46
HDAC8-213ENST00000436675 CYP2D7A0A087X1C5 515 aa17.91■□□□□ 0.46
HDAC8-213ENST00000436675 GOLIM4O00461 696 aa17.91■□□□□ 0.46
HDAC8-213ENST00000436675 PRKAB2O43741 272 aa17.91■□□□□ 0.46
HDAC8-213ENST00000436675 SLC25A27O95847 323 aa17.91■□□□□ 0.46
HDAC8-213ENST00000436675 KCTD2Q14681 263 aa17.91■□□□□ 0.46
HDAC8-213ENST00000436675 SLFNL1Q499Z3 407 aa17.91■□□□□ 0.46
HDAC8-213ENST00000436675 TMEM265A0A087WTH1 108 aa17.9■□□□□ 0.46
HDAC8-213ENST00000436675 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.9■□□□□ 0.46
HDAC8-213ENST00000436675 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.9■□□□□ 0.46
HDAC8-213ENST00000436675 APBB1O00213 710 aa17.9■□□□□ 0.46
HDAC8-213ENST00000436675 WDR46O15213 610 aaKnown RBP17.9■□□□□ 0.46
HDAC8-213ENST00000436675 ZNF865P0CJ78 1059 aaPredicted RBP17.9■□□□□ 0.46
HDAC8-213ENST00000436675 RLBP1P12271 317 aa17.9■□□□□ 0.46
HDAC8-213ENST00000436675 FAAP100Q0VG06 881 aa17.9■□□□□ 0.46
HDAC8-213ENST00000436675 TTF1Q15361 905 aaPredicted RBP17.9■□□□□ 0.46
HDAC8-213ENST00000436675 ZNF792Q3KQV3 632 aa17.9■□□□□ 0.46
HDAC8-213ENST00000436675 TJAP1Q5JTD0 557 aa17.9■□□□□ 0.46
HDAC8-213ENST00000436675 TMED8Q6PL24 325 aaPredicted RBP17.9■□□□□ 0.46
HDAC8-213ENST00000436675 ZNF576Q9H609 170 aa17.9■□□□□ 0.46
HDAC8-213ENST00000436675 SH2D4AQ9H788 454 aa17.9■□□□□ 0.46
HDAC8-213ENST00000436675 SWAP70Q9UH65 585 aa17.9■□□□□ 0.46
HDAC8-213ENST00000436675 DCDC2CA8MYV0 355 aa17.89■□□□□ 0.45
HDAC8-213ENST00000436675 AKR1A1P14550 325 aa17.89■□□□□ 0.45
HDAC8-213ENST00000436675 STAT3P40763 770 aa17.89■□□□□ 0.45
HDAC8-213ENST00000436675 CEP85Q6P2H3 762 aa17.89■□□□□ 0.45
HDAC8-213ENST00000436675 RIOX2Q8IUF8 465 aa17.89■□□□□ 0.45
HDAC8-213ENST00000436675 TIFAQ96CG3 184 aa17.89■□□□□ 0.45
HDAC8-213ENST00000436675 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.89■□□□□ 0.457e-6■■□□□ 11.5
HDAC8-213ENST00000436675 STARD7Q9NQZ5 370 aa17.89■□□□□ 0.45
HDAC8-213ENST00000436675 NRBP1Q9UHY1 535 aa17.89■□□□□ 0.45
HDAC8-213ENST00000436675 CHD9Q3L8U1 2897 aa17.89■□□□□ 0.45
HDAC8-213ENST00000436675 MCM3APO60318 1980 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 NCOR1O75376 2440 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 TCRBV5S4A2TA0A5A2 114 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 GRXCR1A8MXD5 290 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 ADAMTS4O75173 837 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 EEF2P13639 858 aaKnown RBP17.88■□□□□ 0.45
HDAC8-213ENST00000436675 COL9A1P20849 921 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 SLC4A3P48751 1232 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 ACLYP53396 1101 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 IRX5P78411 483 aaPredicted RBP17.88■□□□□ 0.45
HDAC8-213ENST00000436675 CCDC129Q6ZRS4 1044 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 ERC1Q8IUD2 1116 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 RAPGEFL1Q9UHV5 662 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 CNPY2Q9Y2B0 182 aa17.88■□□□□ 0.45
HDAC8-213ENST00000436675 BDP1A6H8Y1 2624 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 TNFRSF10AO00220 468 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 VWA5AO00534 786 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 MBD4O95243 580 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 PBX2P40425 430 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 CDK8P49336 464 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 KCNA10Q16322 511 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 FAM83BQ5T0W9 1011 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 VTI1AQ96AJ9 217 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 ZHX1Q9UKY1 873 aaPredicted RBP17.87■□□□□ 0.45
HDAC8-213ENST00000436675 ADAMTS5Q9UNA0 930 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 SYNRGQ9UMZ2 1314 aa17.87■□□□□ 0.45
HDAC8-213ENST00000436675 MYADML2A6NDP7 307 aa17.86■□□□□ 0.45
HDAC8-213ENST00000436675 TIMP1P01033 207 aa17.86■□□□□ 0.45
HDAC8-213ENST00000436675 ANKRD33Q7Z3H0 272 aa17.86■□□□□ 0.45
HDAC8-213ENST00000436675 NUP133Q8WUM0 1156 aa17.86■□□□□ 0.45
HDAC8-213ENST00000436675 CCDC17Q96LX7 622 aa17.86■□□□□ 0.45
HDAC8-213ENST00000436675 NUP88Q99567 741 aaPredicted RBP17.86■□□□□ 0.45
HDAC8-213ENST00000436675 TSEN34Q9BSV6 310 aaKnown RBP17.86■□□□□ 0.45
HDAC8-213ENST00000436675 PRDM12Q9H4Q4 367 aa17.86■□□□□ 0.45
HDAC8-213ENST00000436675 ZNF214Q9UL59 606 aaPredicted RBP17.86■□□□□ 0.45
HDAC8-213ENST00000436675 PPP1R9AQ9ULJ8 1098 aa17.86■□□□□ 0.45
HDAC8-213ENST00000436675 DIS3Q9Y2L1 958 aaKnown RBP17.86■□□□□ 0.45
HDAC8-213ENST00000436675 MUC3AQ02505 3323 aa17.86■□□□□ 0.45
HDAC8-213ENST00000436675 USP17L12C9JPN9 530 aa17.85■□□□□ 0.45
HDAC8-213ENST00000436675 USP17L21D6R901 530 aa17.85■□□□□ 0.45
HDAC8-213ENST00000436675 CHGBP05060 677 aa17.85■□□□□ 0.45
HDAC8-213ENST00000436675 ACRP10323 421 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms