RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ANGEL2Q5VTE6 544 aaKnown RBP8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 BLOC1S3Q6QNY0 202 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 FAM83AQ86UY5 434 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 METTL16Q86W50 562 aaKnown RBP8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 FOXP4Q8IVH2 680 aaPredicted RBP8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 ZSCAN29Q8IWY8 852 aaPredicted RBP8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 CDAN1Q8IWY9 1227 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 FBXL16Q8N461 479 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 ANKK1Q8NFD2 765 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 IGDCC4Q8TDY8 1250 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 ESR2Q92731 530 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 AGXT2Q9BYV1 514 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 TMEM39BQ9GZU3 492 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 DNAJC18Q9H819 358 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 VRTNQ9H8Y1 702 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 ADARB2Q9NS39 739 aaKnown RBP8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 TOMM22Q9NS69 142 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 PI4KBQ9UBF8 816 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 SERPINB13Q9UIV8 391 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 TPCN1Q9ULQ1 816 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 PSME4Q14997 1843 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 MYH7P12883 1935 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 COL2A1P02458 1487 aaPredicted RBP8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 TIAM2Q8IVF5 1701 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 SH2B2O14492 632 aaPredicted RBP8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 RANBP6O60518 1105 aaKnown RBP8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 NR1I2O75469 434 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 HLA-DOAP06340 250 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 JUNDP17535 347 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 SHMT1P34896 483 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 MCM2P49736 904 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 EVCP57679 992 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 TFAP4Q01664 338 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 BECN1Q14457 450 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 TATDN1Q6P1N9 297 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 ADGRD1Q6QNK2 874 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 NOL8Q76FK4 1167 aaKnown RBP8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 HSCBQ8IWL3 235 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 BRF1Q92994 677 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 TEPSINQ96N21 525 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 ZKSCAN3Q9BRR0 538 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 MKNK2Q9HBH9 465 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 SENP2Q9HC62 589 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 IL17RBQ9NRM6 502 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 LIMCH1Q9UPQ0 1083 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 GPSM3Q9Y4H4 160 aa8.27□□□□□ -1.09
LSM3P3-201ENST00000436601 FAM205CA6NFA0 338 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 FAM196BA6NMK8 535 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 IFIT3O14879 490 aaKnown RBP8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 NMT2O60551 498 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 LARGE1O95461 756 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 EPHX2P34913 555 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 TNNI2P48788 182 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 NT5C2P49902 561 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 MCCD1P59942 119 aaPredicted RBP8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 MAP3K10Q02779 954 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 APOBRQ0VD83 1088 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 RRP1BQ14684 758 aaKnown RBP8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 ANKRD1Q15327 319 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 SEC23AQ15436 765 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 ME3Q16798 604 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 TMEM67Q5HYA8 995 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 USP50Q70EL3 339 aaPredicted RBP8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 SCUBE3Q8IX30 993 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 ZNF444Q8N0Y2 327 aaPredicted RBP8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 NEDD1Q8NHV4 660 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 GPKOWQ92917 476 aaPredicted RBP eCLIP8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 THAP11Q96EK4 314 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 TMX3Q96JJ7 454 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 TMEM87BQ96K49 555 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 CSRNP1Q96S65 589 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 ZSCAN10Q96SZ4 725 aaPredicted RBP8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 MTA3Q9BTC8 594 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 DEFB129Q9H1M3 183 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 TAF1DQ9H5J8 278 aaPredicted RBP8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 LY9Q9HBG7 655 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 ZNF287Q9HBT7 754 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 GGA3Q9NZ52 723 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 SWAP70Q9UH65 585 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 BRPF3Q9ULD4 1205 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 DDX60LQ5H9U9 1706 aaKnown RBP8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 CCDC88AQ3V6T2 1871 aa8.26□□□□□ -1.09
LSM3P3-201ENST00000436601 MYH2Q9UKX2 1941 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 SOWAHBA6NEL2 793 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 TSPY2A6NKD2 308 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 GOLGA8CPA6NN73 597 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 HRO43593 1189 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 AKR1B1P15121 316 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 PDIA3P30101 505 aaKnown RBP8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 LIFRP42702 1097 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 NOVP48745 357 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 JAG1P78504 1218 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 FGD1P98174 961 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 ST3GAL1Q11201 340 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 CUL4AQ13619 759 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 TNFAIP1Q13829 316 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 RCSD1Q6JBY9 416 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 DLK2Q6UY11 383 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 MIGA2Q7L4E1 593 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms