RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 PHF24Q9UPV7 400 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 STK24Q9Y6E0 443 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 PI4KAP2A4QPH2 592 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 RNF40O75150 1001 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 MYCLP1P12525 358 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 CNGA1P29973 690 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 RSRC2Q7L4I2 434 aaKnown RBP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 NANOGNBQ7Z5D8 188 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 PI4KAP1Q8N8J0 262 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 UHMK1Q8TAS1 419 aaKnown RBP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 WDR66Q8TBY9 1149 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 ACSBG1Q96GR2 724 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 TCEANC2Q96MN5 208 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 DUSP9Q99956 384 aaKnown RBP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 L1RE1Q9UN81 338 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 RASSF10A6NK89 507 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 SH3BP5O60239 455 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 USP5P45974 858 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 IRAK1P51617 712 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 TMEM62Q0P6H9 643 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 RCN1Q15293 331 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 CYB5D1Q6P9G0 228 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 CCHCR1Q8TD31 782 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 USP33Q8TEY7 942 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 NSMCE1Q8WV22 266 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 NEK1Q96PY6 1258 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 CHPF2Q9P2E5 772 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 TUBGCP4Q9UGJ1 667 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 LRRD1A4D1F6 860 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 TMEM232C9JQI7 657 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 PFKFB2O60825 505 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 N4BP1O75113 896 aaKnown RBP8.16□□□□□ -1.1
GARNL3-205ENST00000435213 ALOX15P16050 662 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-205ENST00000435213 EIF4A1P60842 406 aaKnown RBP8.16□□□□□ -1.1
GARNL3-205ENST00000435213 NSUN2Q08J23 767 aaKnown RBP eCLIP8.16□□□□□ -1.1
GARNL3-205ENST00000435213 PPFIA1Q13136 1202 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 COL9A3Q14050 684 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-205ENST00000435213 GALNT17Q6IS24 598 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 ANKLE2Q86XL3 938 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 ZMAT2Q96NC0 199 aaKnown RBP8.16□□□□□ -1.1
GARNL3-205ENST00000435213 IWS1Q96ST2 819 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 SENP2Q9HC62 589 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 PCDH18Q9HCL0 1135 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 GALNT8Q9NY28 637 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 BZW2Q9Y6E2 419 aaKnown RBP8.16□□□□□ -1.1
GARNL3-205ENST00000435213 CYP27B1O15528 508 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 TAF5LO75529 589 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 PENKP01210 267 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-205ENST00000435213 ARMCX5Q6P1M9 558 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 BICDL1Q6ZP65 573 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 FCHSD1Q86WN1 690 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 FSIP1Q8NA03 581 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 UIMC1Q96RL1 719 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 TAOK3Q9H2K8 898 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 ATXN10Q9UBB4 475 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 TMCO1Q9UM00 188 aa8.16□□□□□ -1.1
GARNL3-205ENST00000435213 ADAMTS13Q76LX8 1427 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 A0A1W2PQ27 194 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 A0A1W2PQ64 194 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 A0A1W2PQD8 194 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 EIF3FO00303 357 aaPredicted RBP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 TMCC1O94876 653 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 TROVE2P10155 538 aaKnown RBP eCLIP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 BLMHQ13867 455 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 CASP8Q14790 479 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 RNF187Q5TA31 235 aaPredicted RBP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 Q6ZUG5 572 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 ZBTB8BQ8NAP8 495 aaPredicted RBP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 MRPS27Q92552 414 aaKnown RBP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 PPP1R14BQ96C90 147 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 NRDE2Q9H7Z3 1164 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 VIPAS39Q9H9C1 493 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 NLRP2Q9NX02 1062 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 ZFATQ9P243 1243 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 CROTQ9UKG9 612 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 TMED5Q9Y3A6 229 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 TAF6LQ9Y6J9 622 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 SIPA1L3O60292 1781 aaPredicted RBP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 UTYO14607 1347 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 NDUFAB1O14561 156 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 EVI5O60447 810 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 PDHBP11177 359 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 PSME1Q06323 249 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 GIGYF2Q6Y7W6 1299 aaKnown RBP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 MAMSTRQ6ZN01 415 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 FMR1NBQ8N0W7 255 aaPredicted RBP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 XPO4Q9C0E2 1151 aaKnown RBP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 C9orf78Q9NZ63 289 aaPredicted RBP8.15□□□□□ -1.1
GARNL3-205ENST00000435213 SUGT1Q9Y2Z0 365 aa8.15□□□□□ -1.1
GARNL3-205ENST00000435213 ATP4AP20648 1035 aa8.15□□□□□ -1.11
GARNL3-205ENST00000435213 CBX3Q13185 183 aa8.15□□□□□ -1.11
GARNL3-205ENST00000435213 PACS1Q6VY07 963 aa8.15□□□□□ -1.11
GARNL3-205ENST00000435213 CCDC121Q6ZUS5 278 aa8.15□□□□□ -1.11
GARNL3-205ENST00000435213 NSUN7Q8NE18 718 aaKnown RBP8.15□□□□□ -1.11
GARNL3-205ENST00000435213 EAF2Q96CJ1 260 aaPredicted RBP8.15□□□□□ -1.11
GARNL3-205ENST00000435213 OPTNQ96CV9 577 aa8.15□□□□□ -1.11
GARNL3-205ENST00000435213 USP28Q96RU2 1077 aa8.15□□□□□ -1.11
GARNL3-205ENST00000435213 PA2G4Q9UQ80 394 aaKnown RBP8.15□□□□□ -1.11
GARNL3-205ENST00000435213 OVOS2A0A0G2JMS6 1433 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms