RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 KCNG1Q9UIX4 513 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 SPTLC2O15270 562 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 TNNC2P02585 160 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 SNRNP48Q6IEG0 339 aaKnown RBP13.54□□□□□ -0.24
UBE3B-203ENST00000434735 SLC7A3Q8WY07 619 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 SLU7O95391 586 aaKnown RBP13.54□□□□□ -0.24
UBE3B-203ENST00000434735 IGHDP01880 384 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 DNMT1P26358 1616 aaKnown RBP13.54□□□□□ -0.24
UBE3B-203ENST00000434735 TYW5A2RUC4 315 aaKnown RBP13.54□□□□□ -0.24
UBE3B-203ENST00000434735 UBE2Q2LH0YL09 131 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 ERCC3P19447 782 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 PTPN14Q15678 1187 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 CD209Q9NNX6 404 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 GPKOWQ92917 476 aaPredicted RBP eCLIP13.53□□□□□ -0.247e-6■■■■■ 33.4
UBE3B-203ENST00000434735 CCDC175P0C221 793 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 RSRC2Q7L4I2 434 aaKnown RBP13.53□□□□□ -0.24
UBE3B-203ENST00000434735 ELMOD1Q8N336 334 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 RYBPQ8N488 228 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-203ENST00000434735 KIFAP3Q92845 792 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 BICDL2A1A5D9 508 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 HMGCS2P54868 508 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 PPP2R5DQ14738 602 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 CEP57Q86XR8 500 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 SP8Q8IXZ3 490 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 STIM2Q9P246 746 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 FAM135BQ49AJ0 1406 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 RASSF7Q02833 373 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 TBC1D8BQ0IIM8 1120 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 RC3H1Q5TC82 1133 aaKnown RBP13.53□□□□□ -0.24
UBE3B-203ENST00000434735 MAP1SQ66K74 1059 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-203ENST00000434735 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-203ENST00000434735 DYNLL2Q96FJ2 89 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 RAVER2Q9HCJ3 691 aaKnown RBP13.53□□□□□ -0.24
UBE3B-203ENST00000434735 KCNJ14Q9UNX9 436 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 AGTPBP1Q9UPW5 1226 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 GOLGA6L9A6NEM1 432 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 XPOTO43592 962 aaKnown RBP13.53□□□□□ -0.24
UBE3B-203ENST00000434735 CALUO43852 315 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-203ENST00000434735 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-203ENST00000434735 TTC38Q5R3I4 469 aa13.53□□□□□ -0.24
UBE3B-203ENST00000434735 URI1O94763 535 aaPredicted RBP13.52□□□□□ -0.24
UBE3B-203ENST00000434735 TMEM191BP0C7N4 346 aa13.52□□□□□ -0.24
UBE3B-203ENST00000434735 PTGS1P23219 599 aa13.52□□□□□ -0.24
UBE3B-203ENST00000434735 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.24
UBE3B-203ENST00000434735 RNF207Q6ZRF8 634 aa13.52□□□□□ -0.24
UBE3B-203ENST00000434735 CAMSAP1Q5T5Y3 1602 aa13.52□□□□□ -0.24
UBE3B-203ENST00000434735 CYP4A11Q02928 519 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 PSMD2Q13200 908 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 JPH2Q9BR39 696 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-203ENST00000434735 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 PCDHB15Q9Y5E8 787 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 C6orf222P0C671 652 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-203ENST00000434735 KIAA0753Q2KHM9 967 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 NEK11Q8NG66 645 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 GTPBP4Q9BZE4 634 aaKnown RBP13.52□□□□□ -0.25
UBE3B-203ENST00000434735 GRPEL1Q9HAV7 217 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBE3B-203ENST00000434735 ATP7BP35670 1465 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 MECOMQ03112 1051 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 PPP2R5BQ15173 497 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 DIS3L2Q8IYB7 885 aaKnown RBP13.52□□□□□ -0.25
UBE3B-203ENST00000434735 ZNF654Q8IZM8 581 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 ZNF577Q9BSK1 485 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 DDX19AQ9NUU7 478 aaKnown RBP13.52□□□□□ -0.25
UBE3B-203ENST00000434735 FBXO40Q9UH90 709 aa13.52□□□□□ -0.25
UBE3B-203ENST00000434735 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 TNKSO95271 1327 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 SYNJ2BP-COX16A0A087WUM0 186 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 COX16Q9P0S2 106 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 FAM170AA1A519 330 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 HDAC1Q13547 482 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-203ENST00000434735 BARGINQ6ZT62 677 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 EXOC8Q8IYI6 725 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 MRPS27Q92552 414 aaKnown RBP13.51□□□□□ -0.25
UBE3B-203ENST00000434735 FCGRTP55899 365 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 FAM83BQ5T0W9 1011 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 GPATCH4Q5T3I0 446 aaKnown RBP13.51□□□□□ -0.25
UBE3B-203ENST00000434735 RUFY3Q7L099 469 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 TMX3Q96JJ7 454 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 C1orf167Q5SNV9 1468 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 DMP1Q13316 513 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-203ENST00000434735 CCDC183Q5T5S1 534 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 LINC00116Q8NCU8 138 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 NACC1Q96RE7 527 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 FAM169AQ9Y6X4 670 aa13.51□□□□□ -0.25
UBE3B-203ENST00000434735 BNIP3LO60238 219 aa13.5□□□□□ -0.25
UBE3B-203ENST00000434735 MTERF2Q49AM1 385 aa13.5□□□□□ -0.25
UBE3B-203ENST00000434735 PRR5LQ6MZQ0 368 aa13.5□□□□□ -0.25
UBE3B-203ENST00000434735 CCDC155Q8N6L0 562 aa13.5□□□□□ -0.25
UBE3B-203ENST00000434735 KIF18AQ8NI77 898 aa13.5□□□□□ -0.25
UBE3B-203ENST00000434735 IRAK4Q9NWZ3 460 aa13.5□□□□□ -0.25
UBE3B-203ENST00000434735 PSMD14O00487 310 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms