RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 GIMAP7Q8NHV1 300 aa13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 PPP2R2CQ9Y2T4 447 aa13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 SPATA31A1Q5TZJ5 1347 aa13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 TEX33O43247 280 aa13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 ZSCAN12O43309 604 aa13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 IVLP07476 585 aa13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 SARSP49591 514 aaKnown RBP13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 RPS8P62241 208 aaKnown RBP13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 KARSQ15046 597 aaKnown RBP13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 TTC38Q5R3I4 469 aa13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 KCND1Q9NSA2 647 aa13.79□□□□□ -0.2
SEMA3F-206ENST00000434342 ARHGAP6O43182 974 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 PRPF3O43395 683 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 N4BP1O75113 896 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 PAX7P23759 505 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 TBC1D9BQ66K14 1250 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 TOGARAM2Q6ZUX3 1019 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 SRBD1Q8N5C6 995 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 EXOC4Q96A65 974 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 PHF20Q9BVI0 1012 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 SRP68Q9UHB9 627 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 MAPK8IP1Q9UQF2 711 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 NBPF20Q3BBV1 942 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 KAT2BQ92831 832 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 PAGE5Q96GU1 130 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 CDCA7Q9BWT1 371 aaPredicted RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 PDE11AQ9HCR9 933 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 XIRP1Q702N8 1843 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 PPP1R12AO14974 1030 aaPredicted RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 HIBADHP31937 336 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 CORO7P57737 925 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 FUT2Q10981 343 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 MAP9Q49MG5 647 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 NBPF5PQ86XG9 351 aaPredicted RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 CEP120Q8N960 986 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 NSUN4Q96CB9 384 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 NLRP3Q96P20 1036 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 L2HGDHQ9H9P8 463 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 ANAPC4Q9UJX5 808 aa13.78□□□□□ -0.2
SEMA3F-206ENST00000434342 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 PLCD1P51178 756 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 MTF1Q14872 753 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 PPP2R5BQ15173 497 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 WWC2Q6AWC2 1192 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 TRIM65Q6PJ69 517 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 TC2NQ8N9U0 490 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 LINC00116Q8NCU8 138 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 RASSF8Q8NHQ8 419 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 MTA3Q9BTC8 594 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 CRNKL1Q9BZJ0 848 aaKnown RBP13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 MYH7P12883 1935 aa13.77□□□□□ -0.2
SEMA3F-206ENST00000434342 TPM1P09493 284 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 ZNF18P17022 549 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 CC2D1AQ6P1N0 951 aaPredicted RBP13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 TMTC3Q6ZXV5 915 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 KIRREL3Q8IZU9 778 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 BRIP1Q9BX63 1249 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 DCP1AQ9NPI6 582 aaPredicted RBP13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 RBM28Q9NW13 759 aaKnown RBP13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 NUP98P52948 1817 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 CCT6AP40227 531 aaKnown RBP13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 KCNJ6P48051 423 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 NT5DC1Q5TFE4 455 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 PTF1AQ7RTS3 328 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 TADA2BQ86TJ2 420 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 TXNRD3Q86VQ6 643 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 PPFIBP1Q86W92 1011 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 WDR24Q96S15 920 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 ARFGAP3Q9NP61 516 aa13.77□□□□□ -0.21
SEMA3F-206ENST00000434342 RCAN1P53805 252 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 SF3B3Q15393 1217 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 SWT1Q5T5J6 900 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 DZIP1Q86YF9 867 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 SUGP1Q8IWZ8 645 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 TRIML1Q8N9V2 468 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 RASGRP4Q8TDF6 673 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 GPKOWQ92917 476 aaPredicted RBP eCLIP13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 SETDB2Q96T68 719 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 IRX2Q9BZI1 471 aaPredicted RBP13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 LZTFL1Q9NQ48 299 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 C4AP0C0L4 1744 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 C4BP0C0L5 1744 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 ITGB4P16144 1822 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 ADAMTS3O15072 1205 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 FANCGO15287 622 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 CALM1P0DP23 149 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 CALM2P0DP24 149 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 CALM3P0DP25 149 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 CLEC4GQ6UXB4 293 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 IGSF22Q8N9C0 903 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 FAN1Q9Y2M0 1017 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 FAM182BQ5T319 152 aa13.76□□□□□ -0.21
SEMA3F-206ENST00000434342 ARMC3Q5W041 872 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms