RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 FTOQ9C0B1 505 aaKnown RBP eCLIP12.19□□□□□ -0.46
NEFM-202ENST00000433454 DEFB129Q9H1M3 183 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 SH3GLB2Q9NR46 395 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 POLR3EQ9NVU0 708 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 SEC63Q9UGP8 760 aaKnown RBP12.19□□□□□ -0.46
NEFM-202ENST00000433454 ZBTB21Q9ULJ3 1066 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 SYNPO2Q9UMS6 1093 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 GOLGA6L4A6NEF3 574 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 GSE1Q14687 1217 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 C9orf131Q5VYM1 1079 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 DCAF4Q8WV16 495 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 SHISA4Q96DD7 197 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 TEPSINQ96N21 525 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 RTEL1Q9NZ71 1219 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 SCAF8Q9UPN6 1271 aaKnown RBP12.18□□□□□ -0.46
NEFM-202ENST00000433454 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
NEFM-202ENST00000433454 JAG1P78504 1218 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 FAM177A1Q8N128 213 aaPredicted RBP12.18□□□□□ -0.46
NEFM-202ENST00000433454 GMCL1P1Q8NEA9 526 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 CCDC148Q8NFR7 591 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 CPVLQ9H3G5 476 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 RCOR1Q9UKL0 485 aa12.18□□□□□ -0.46
NEFM-202ENST00000433454 RAD21O60216 631 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 YEATS4O95619 227 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 CALML3P27482 149 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 SLC1A4P43007 532 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 NASPP49321 788 aaPredicted RBP12.17□□□□□ -0.46
NEFM-202ENST00000433454 NLRP5P59047 1200 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 NR5A1Q13285 461 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 ANGEL2Q5VTE6 544 aaKnown RBP12.17□□□□□ -0.46
NEFM-202ENST00000433454 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 SIAH1Q8IUQ4 282 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 GPKOWQ92917 476 aaPredicted RBP eCLIP12.17□□□□□ -0.46
NEFM-202ENST00000433454 SYAP1Q96A49 352 aaPredicted RBP12.17□□□□□ -0.46
NEFM-202ENST00000433454 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 ARHGEF10LQ9HCE6 1279 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 GPCPD1Q9NPB8 672 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 DDNO94850 711 aaPredicted RBP12.17□□□□□ -0.46
NEFM-202ENST00000433454 CAP2P40123 477 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 EPS15P42566 896 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 STK38Q15208 465 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 TPRNQ4KMQ1 711 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 ANO1Q5XXA6 986 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 SLFN13Q68D06 897 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 HOMER1Q86YM7 354 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 OXER1Q8TDS5 423 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 UBA5Q9GZZ9 404 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 BARHL2Q9NY43 387 aa12.17□□□□□ -0.46
NEFM-202ENST00000433454 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
NEFM-202ENST00000433454 ASNSP08243 561 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 VEGFAP15692 232 aaPredicted RBP12.16□□□□□ -0.46
NEFM-202ENST00000433454 RILPL1Q5EBL4 403 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
NEFM-202ENST00000433454 HOOK2Q96ED9 719 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 GGA3Q9NZ52 723 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 CLIC4Q9Y696 253 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 ATAD5Q96QE3 1844 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 F5H6K3 240 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 hCG_1984214I3L0E3 225 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 KLRC3Q07444 240 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 NPY5RQ15761 445 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 GPR162Q16538 588 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 KCTD1Q719H9 257 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 ZNF713Q8N859 430 aaPredicted RBP12.16□□□□□ -0.46
NEFM-202ENST00000433454 LINC00301Q8NCQ3 95 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 GMCL1Q96IK5 515 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 PIGSQ96S52 555 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 VAT1LQ9HCJ6 419 aa12.16□□□□□ -0.46
NEFM-202ENST00000433454 STXBP3O00186 592 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 NDUFB10O96000 172 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 ME1P48163 572 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 SF3A1Q15459 793 aaKnown RBP12.15□□□□□ -0.46
NEFM-202ENST00000433454 GALNT17Q6IS24 598 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 BICD2Q8TD16 824 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 PGBD1Q96JS3 809 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 SH2D4AQ9H788 454 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 ADARB2Q9NS39 739 aaKnown RBP12.15□□□□□ -0.46
NEFM-202ENST00000433454 TMEM63CQ9P1W3 806 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 PPP2R3BQ9Y5P8 575 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 PHF20L1A8MW92 1017 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 DCAF15Q66K64 600 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 ADGRF4Q8IZF3 695 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 GOPCQ9HD26 462 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 PCDHA4Q9UN74 947 aa12.15□□□□□ -0.46
NEFM-202ENST00000433454 A0A1W2PRG0 241 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 SPTLC2O15270 562 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 HIRAP54198 1017 aaPredicted RBP12.14□□□□□ -0.47
NEFM-202ENST00000433454 NAPAP54920 295 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 ZSCAN23Q3MJ62 389 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 NBPF12Q5TAG4 269 aaPredicted RBP12.14□□□□□ -0.47
NEFM-202ENST00000433454 TTBK2Q6IQ55 1244 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 TYW1BQ6NUM6 668 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 GINM1Q9NU53 330 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 TMX2Q9Y320 296 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
NEFM-202ENST00000433454 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms