RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 GOLGA8KD6RF30 607 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 MMP14P50281 582 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 ACTN3Q08043 901 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 EARS2Q5JPH6 523 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 B4GALNT4Q76KP1 1039 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 RASSF8Q8NHQ8 419 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 ZNHIT6Q9NWK9 470 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 ZNF532Q9HCE3 1301 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 ERICH2A1L162 156 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 IFNAR1P17181 557 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 PAPD7Q5XG87 772 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 TSEN2Q8NCE0 465 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 AGPAT5Q9NUQ2 364 aa12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 LIMA1Q9UHB6 759 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-202ENST00000433297 SPAG1Q07617 926 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 IQCEQ6IPM2 695 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 IFT81Q8WYA0 676 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 RPGRIP1Q96KN7 1286 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 MCAMP43121 646 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 SEC24CP53992 1094 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 KIF5AQ12840 1032 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 NNTQ13423 1086 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 TRIM14Q14142 442 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 WTAPQ15007 396 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 METTL24Q5JXM2 366 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 SEMA3EO15041 775 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 ATP2C2O75185 946 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 ZPR1O75312 459 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 DEXIO95424 95 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 PARP1P09874 1014 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 SCP2P22307 547 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 NAP1L1P55209 391 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 APBA1Q02410 837 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 IFT88Q13099 833 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 TTMPQ5BVD1 217 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 KRT26Q7Z3Y9 468 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 LRP10Q7Z4F1 713 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 DONSONQ9NYP3 566 aa12.93□□□□□ -0.34
HMGCS1-202ENST00000433297 OVOS2A0A0G2JMS6 1433 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 WNT7AO00755 349 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 MEFVO15553 781 aaPredicted RBP12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 CSB-PGBD3P0DP91 1061 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 KLK7P49862 253 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 AMOTL1Q8IY63 956 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 CNPY4Q8N129 248 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 PLIN2Q99541 437 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 AATFQ9NY61 560 aaKnown RBP eCLIP12.92□□□□□ -0.341e-6■■■□□ 16.4
HMGCS1-202ENST00000433297 WDR19Q8NEZ3 1342 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 ADD2P35612 726 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 WDR59Q6PJI9 974 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 MFSD6Q6ZSS7 791 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 CRACR2BQ8N4Y2 399 aaPredicted RBP12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 ANKRD13CQ8N6S4 541 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 MB21D1Q8N884 522 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 PRPF38AQ8NAV1 312 aaKnown RBP12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 EHBP1Q8NDI1 1231 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 AENQ8WTP8 325 aaKnown RBP12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 NHEJ1Q9H9Q4 299 aaPredicted RBP12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 MYH8P13535 1937 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 PLEKHG1Q9ULL1 1385 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 B4DLN1 442 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 CLGNO14967 610 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 PRCPP42785 496 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 CDR1P51861 262 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 CABP4P57796 275 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 LRWD1Q9UFC0 647 aa12.92□□□□□ -0.34
HMGCS1-202ENST00000433297 ESYT3A0FGR9 886 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 FRMD3A2A2Y4 597 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 FECHP22830 423 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 HPDP32754 393 aaPredicted RBP12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 GUCY2FP51841 1108 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 RNPC3Q96LT9 517 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 PPANQ9NQ55 473 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 PIH1D3Q9NQM4 214 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 MAGEC2Q9UBF1 373 aaPredicted RBP12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 NF2P35240 595 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 RNASE9P60153 205 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 PTGDRQ13258 359 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 SPA17Q15506 151 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 SGMS1Q86VZ5 419 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 SPATA4Q8NEY3 305 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 N4BP2L2Q92802 583 aaPredicted RBP12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 CCDC43Q96MW1 224 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 ZIM3Q96PE6 472 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 UBAC1Q9BSL1 405 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 MLXIPQ9HAP2 919 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 TBC1D2BQ9UPU7 963 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 TBX22Q9Y458 520 aa12.91□□□□□ -0.34
HMGCS1-202ENST00000433297 XDHP47989 1333 aa12.9□□□□□ -0.34
HMGCS1-202ENST00000433297 NFRKBQ6P4R8 1299 aa12.9□□□□□ -0.34
HMGCS1-202ENST00000433297 CCDC42Q96M95 316 aa12.9□□□□□ -0.34
HMGCS1-202ENST00000433297 SH3GL2Q99962 352 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms