RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 PRO3102Q9H379 93 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 RABGAP1Q9Y3P9 1069 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CYP2B6P20813 491 aa11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 SEPT2Q15019 361 aa11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 PLEKHH3Q7Z736 793 aa11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ANKLE1Q8NAG6 615 aa11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 PAWRQ96IZ0 340 aaKnown RBP11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 PAGR1Q9BTK6 254 aa11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 BOLA2Q9H3K6 86 aa11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ARMT1Q9H993 441 aa11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 HMX1Q9NP08 348 aaPredicted RBP11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CABP5Q9NP86 173 aa11.37□□□□□ -0.59
CDC42-IT1-201ENST00000431803 A0A0G2JMZ2 1700 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 MBD4O95243 580 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CYP2D6P10635 497 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 TYW1BQ6NUM6 668 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 TRMT44Q8IYL2 757 aaKnown RBP11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 APBA2Q99767 749 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 LRRCC1Q9C099 1032 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ATP8A2Q9NTI2 1148 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 SWAP70Q9UH65 585 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 OGDHLQ9ULD0 1010 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 NR2E3Q9Y5X4 410 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ALPK3Q96L96 1907 aa11.36□□□□□ -0.59
CDC42-IT1-201ENST00000431803 LAMA2P24043 3122 aaKnown RBP11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 MYH7P12883 1935 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 TK2O00142 265 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 PRKAB2O43741 272 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CHGBP05060 677 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ZKSCAN1P17029 563 aaPredicted RBP11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 RGS2P41220 211 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CCNA1P78396 465 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 UBE3CQ15386 1083 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CCL14Q16627 93 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 TMEM179Q6ZVK1 233 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 NECAB2Q7Z6G3 386 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CCAR1Q8IX12 1150 aaKnown RBP11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 DDX12PQ92771 950 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 DYNLL2Q96FJ2 89 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 BCL11AQ9H165 835 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 RPAP3Q9H6T3 665 aaPredicted RBP11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 BTBD7Q9P203 1132 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 RLFQ13129 1914 aa11.35□□□□□ -0.59
CDC42-IT1-201ENST00000431803 SMIM22K7EJ46 135 aa11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 MPHOSPH10O00566 681 aaKnown RBP11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 HOXC6P09630 235 aa11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 GRB14Q14449 540 aa11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 KIAA1755Q5JYT7 1200 aa11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 C12orf60Q5U649 245 aa11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 SIAH1Q8IUQ4 282 aa11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 NBPF3Q9H094 633 aa11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 BAZ2AQ9UIF9 1905 aaKnown RBP11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ZNF236Q9UL36 1845 aa11.34□□□□□ -0.59
CDC42-IT1-201ENST00000431803 MYH8P13535 1937 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 CYP2D7A0A087X1C5 515 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 SLC15A5A6NIM6 579 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 SMARCA5O60264 1052 aaPredicted RBP11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 GLRX3O76003 335 aaKnown RBP11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 IGHA2P01877 340 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 AKR1B1P15121 316 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 C16orf86Q6ZW13 317 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 CLEC10AQ8IUN9 316 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 LPAR1Q92633 364 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ECHDC1Q9NTX5 307 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 TMX2Q9Y320 296 aa11.33□□□□□ -0.6
CDC42-IT1-201ENST00000431803 USP17L12C9JPN9 530 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 USP17L21D6R901 530 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 CCND3P30281 292 aaPredicted RBP11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 CDK8P49336 464 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ICA1Q05084 483 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 COG2Q14746 738 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ZSCAN25Q6NSZ9 544 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 CCDC17Q96LX7 622 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 EPAS1Q99814 870 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 TANGO6Q9C0B7 1094 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 PUS7LQ9H0K6 701 aaKnown RBP11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 C11orf49Q9H6J7 331 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 DCTPP1Q9H773 170 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 CWC22Q9HCG8 908 aaKnown RBP11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 HOXC10Q9NYD6 342 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 FLRT1Q9NZU1 646 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 COL6A3P12111 3177 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 PFASO15067 1338 aa11.32□□□□□ -0.6
CDC42-IT1-201ENST00000431803 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 FRMPD3Q5JV73 1810 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 A0A1W2PPC1 479 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 COL6A1P12109 1028 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms