RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 AGMOQ6ZNB7 445 aa3.77□□□□□ -1.81
CDC40-204ENST00000431461 ZSCAN29Q8IWY8 852 aaPredicted RBP3.77□□□□□ -1.81
CDC40-204ENST00000431461 ACSF2Q96CM8 615 aaPredicted RBP3.77□□□□□ -1.81
CDC40-204ENST00000431461 EPB41L4AQ9HCS5 686 aaPredicted RBP3.77□□□□□ -1.81
CDC40-204ENST00000431461 TTF2Q9UNY4 1162 aaKnown RBP3.77□□□□□ -1.81
CDC40-204ENST00000431461 ZNF281Q9Y2X9 895 aa3.77□□□□□ -1.81
CDC40-204ENST00000431461 CCDC9Q9Y3X0 531 aaKnown RBP3.77□□□□□ -1.81
CDC40-204ENST00000431461 LRRN2O75325 713 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 EFEMP2O95967 443 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 VIPR1P32241 457 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 RGS19P49795 217 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 HMGA2P52926 109 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 ATP2B2Q01814 1243 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 SEPT6Q14141 434 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 RTP5Q14D33 572 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 TSNAXIP1Q2TAA8 658 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 SND1Q7KZF4 910 aaKnown RBP eCLIP3.76□□□□□ -1.81
CDC40-204ENST00000431461 FAM129CQ86XR2 697 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 SLC16A11Q8NCK7 471 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 LINC01599Q8WXQ3 324 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 ASB16Q96NS5 453 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 CRTAC1Q9NQ79 661 aa3.76□□□□□ -1.81
CDC40-204ENST00000431461 RBM47A0AV96 593 aaKnown RBP3.75□□□□□ -1.81
CDC40-204ENST00000431461 MATN3O15232 486 aa3.75□□□□□ -1.81
CDC40-204ENST00000431461 PRICKLE3O43900 615 aaPredicted RBP3.75□□□□□ -1.81
CDC40-204ENST00000431461 USP2O75604 605 aaPredicted RBP3.75□□□□□ -1.81
CDC40-204ENST00000431461 YBX1P67809 324 aaKnown RBP3.75□□□□□ -1.81
CDC40-204ENST00000431461 TEKQ02763 1124 aa3.75□□□□□ -1.81
CDC40-204ENST00000431461 RPL6Q02878 288 aaKnown RBP3.75□□□□□ -1.81
CDC40-204ENST00000431461 CCDC85BQ15834 202 aaPredicted RBP3.75□□□□□ -1.81
CDC40-204ENST00000431461 TMCO4Q5TGY1 634 aa3.75□□□□□ -1.81
CDC40-204ENST00000431461 CYB5D2Q8WUJ1 264 aa3.75□□□□□ -1.81
CDC40-204ENST00000431461 RNF141Q8WVD5 230 aa3.75□□□□□ -1.81
CDC40-204ENST00000431461 MIR1-1HGQ9H1L0 117 aa3.75□□□□□ -1.81
CDC40-204ENST00000431461 SLITRK6Q9H5Y7 841 aa3.75□□□□□ -1.81
CDC40-204ENST00000431461 CNTD2Q9H8S5 307 aa3.75□□□□□ -1.81
CDC40-204ENST00000431461 NOTOA8MTQ0 251 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 UPK3BL1B0FP48 263 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 UPK3BL2E5RIL1 263 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 GRIN3BO60391 1043 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 EIF4BP23588 611 aaKnown RBP3.74□□□□□ -1.81
CDC40-204ENST00000431461 KCNC1P48547 511 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 LIG3P49916 1009 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 CDR1P51861 262 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 NCKAP1LP55160 1127 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 TMEM201Q5SNT2 666 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 NLRX1Q86UT6 975 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 TMEFF1Q8IYR6 380 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 MZB1Q8WU39 189 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 PWWP2AQ96N64 755 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 G6PC3Q9BUM1 346 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 IVNS1ABPQ9Y6Y0 642 aa3.74□□□□□ -1.81
CDC40-204ENST00000431461 FSHBP01225 129 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 RLBP1P12271 317 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 GNA15P30679 374 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 YARSP54577 528 aaKnown RBP3.73□□□□□ -1.81
CDC40-204ENST00000431461 ADAM17P78536 824 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 TMEM62Q0P6H9 643 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 CCDC27Q2M243 656 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 UBXN11Q5T124 520 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 FERMT3Q86UX7 667 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 SLFN12Q8IYM2 578 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 NLGN1Q8N2Q7 840 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 ENOX1Q8TC92 643 aaKnown RBP3.73□□□□□ -1.81
CDC40-204ENST00000431461 C1QTNF3Q9BXJ4 246 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 AK5Q9Y6K8 562 aa3.73□□□□□ -1.81
CDC40-204ENST00000431461 SHISA3A0PJX4 238 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 CYR61O00622 381 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 NRDCO43847 1150 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 PLCG1P19174 1290 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 TFE3P19532 575 aaPredicted RBP3.72□□□□□ -1.81
CDC40-204ENST00000431461 RPL10P27635 214 aaKnown RBP3.72□□□□□ -1.81
CDC40-204ENST00000431461 GDF5P43026 501 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 KIR3DS1Q14943 382 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 SLC14A2Q15849 920 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 CCDC84Q86UT8 332 aaPredicted RBP3.72□□□□□ -1.81
CDC40-204ENST00000431461 ADGRG2Q8IZP9 1017 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 TTC9BQ8N6N2 239 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 TP53I13Q8NBR0 393 aaPredicted RBP3.72□□□□□ -1.81
CDC40-204ENST00000431461 FAM13CQ8NE31 585 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 JARID2Q92833 1246 aaPredicted RBP3.72□□□□□ -1.81
CDC40-204ENST00000431461 VWCEQ96DN2 955 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 ASPNQ9BXN1 380 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 ZMYM5Q9UJ78 669 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 CORINQ9Y5Q5 1042 aa3.72□□□□□ -1.81
CDC40-204ENST00000431461 PRR36Q9H6K5 1346 aa3.71□□□□□ -1.81
CDC40-204ENST00000431461 LDHBP07195 334 aaKnown RBP3.71□□□□□ -1.82
CDC40-204ENST00000431461 PNLIPP16233 465 aa3.71□□□□□ -1.82
CDC40-204ENST00000431461 KIR2DL1P43626 348 aaPredicted RBP3.71□□□□□ -1.82
CDC40-204ENST00000431461 KIR2DL2P43627 348 aaPredicted RBP3.71□□□□□ -1.82
CDC40-204ENST00000431461 CPZQ66K79 652 aa3.71□□□□□ -1.82
CDC40-204ENST00000431461 DIEXFQ68CQ4 756 aaKnown RBP3.71□□□□□ -1.82
CDC40-204ENST00000431461 RNF111Q6ZNA4 994 aa3.71□□□□□ -1.82
CDC40-204ENST00000431461 CEP128Q6ZU80 1094 aa3.71□□□□□ -1.82
CDC40-204ENST00000431461 TMC6Q7Z403 805 aa3.71□□□□□ -1.82
CDC40-204ENST00000431461 WAPLQ7Z5K2 1190 aa3.71□□□□□ -1.82
CDC40-204ENST00000431461 USHBP1Q8N6Y0 703 aa3.71□□□□□ -1.82
CDC40-204ENST00000431461 KREMEN1Q96MU8 473 aa3.71□□□□□ -1.82
CDC40-204ENST00000431461 GZF1Q9H116 711 aaPredicted RBP3.71□□□□□ -1.82
CDC40-204ENST00000431461 A0A1B0GTL3 188 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms