RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MASP1P48740 699 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 ZNF445P59923 1031 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 INSM1Q01101 510 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 CDK5R2Q13319 367 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 TM4SF20Q53R12 229 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 TRIM61Q5EBN2 209 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 YOD1Q5VVQ6 348 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 TRIM59Q8IWR1 403 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 BVESQ8NE79 360 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 UTP4Q969X6 686 aaKnown RBP4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 C1orf159Q96HA4 380 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 FAM83CQ9BQN1 747 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 AARSD1Q9BTE6 412 aaKnown RBP4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 DHRS4Q9BTZ2 278 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 SSU72Q9NP77 194 aaKnown RBP4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 MRPS23Q9Y3D9 190 aaKnown RBP4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 CD2APQ9Y5K6 639 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 DNAJC25-GNG10A0A024R161 153 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 TRAV20A0A0B4J274 112 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 FAM95CA0A1B0GW59 222 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 FAM83GA6ND36 823 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 AGRPO00253 132 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 IGF2BP3O00425 579 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 PLD2O14939 933 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 LEFTY1O75610 366 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 SCG5P05408 212 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 SRFP11831 508 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 POU3F3P20264 500 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 GRIA2P42262 883 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 AMPD3Q01432 767 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 GRB10Q13322 594 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 SNW1Q13573 536 aaKnown RBP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 HSP90AA2PQ14568 343 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 SV2CQ496J9 727 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 FNDC3BQ53EP0 1204 aaKnown RBP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 FAM209AQ5JX71 171 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 RNF187Q5TA31 235 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 KRT26Q7Z3Y9 468 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 CD163Q86VB7 1156 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 CLEC10AQ8IUN9 316 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 RPUSD2Q8IZ73 545 aaKnown RBP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 TOP6BLQ8N6T0 577 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 DTWD2Q8NBA8 298 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 NINJ1Q92982 152 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 FGD4Q96M96 766 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 HEXIM2Q96MH2 286 aaKnown RBP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 LGR4Q9BXB1 951 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 PRDM14Q9GZV8 571 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 MKRN2Q9H000 416 aaKnown RBP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 GBP3Q9H0R5 595 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 SPC25Q9HBM1 224 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 PCDH12Q9NPG4 1184 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 FAM86C1Q9NVL1 165 aa4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 CGGBP1Q9UFW8 167 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P27-201ENST00000431429 A0A087X0B3 334 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 TRBV23-1A0A0A0MS06 115 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 DNAJC6O75061 913 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 LRRN2O75325 713 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 PPM1BO75688 479 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 ITGA4P13612 1032 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 L1CAMP32004 1257 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 ADMP35318 185 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 KIR3DL1P43629 444 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 GSK3AP49840 483 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 PABPC4Q13310 644 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 TESK1Q15569 626 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 FILIP1Q7Z7B0 1213 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 ZAR1Q86SH2 424 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 THNSL2Q86YJ6 484 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 SCUBE1Q8IWY4 988 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 LRRN4CLQ8ND94 238 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 CLUHP3Q96NS8 147 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 MRPL4Q9BYD3 311 aaKnown RBP4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 DIS3Q9Y2L1 958 aaKnown RBP4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 NOP58Q9Y2X3 529 aaKnown RBP4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 PCDHB12Q9Y5F1 795 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 COL4A3BPQ9Y5P4 624 aa4.57□□□□□ -1.68
HMGB1P27-201ENST00000431429 DHX15O43143 795 aaKnown RBP4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 SIGLEC6O43699 453 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 DLX3O60479 287 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 ITGB2P05107 769 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 PABPC1P11940 636 aaKnown RBP4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 GFRA1P56159 465 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 MAP4K2Q12851 820 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 CBX2Q14781 532 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 OGFOD3Q6PK18 319 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 PAOXQ6QHF9 649 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 BEND4Q6ZU67 534 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 TMC3Q7Z5M5 1100 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 GSTCDQ8NEC7 633 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 MFSD3Q96ES6 412 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 DCAF5Q96JK2 942 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 HDAC8Q9BY41 377 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 SLKQ9H2G2 1235 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 NKX2-4Q9H2Z4 354 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 TRIM39Q9HCM9 518 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 CAPN6Q9Y6Q1 641 aa4.56□□□□□ -1.68
HMGB1P27-201ENST00000431429 SHISA3A0PJX4 238 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 PRR33A8MZF0 331 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 C1QTNF9BB2RNN3 333 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms