RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 RABGAP1Q9Y3P9 1069 aa21.85■■□□□ 1.09
DDR1-236ENST00000431373 EPB41L2O43491 1005 aaKnown RBP21.84■■□□□ 1.09
DDR1-236ENST00000431373 MCCP23508 829 aa21.84■■□□□ 1.09
DDR1-236ENST00000431373 POTEEQ6S8J3 1075 aa21.84■■□□□ 1.09
DDR1-236ENST00000431373 MB21D2Q8IYB1 491 aaPredicted RBP21.84■■□□□ 1.09
DDR1-236ENST00000431373 GPRC5AQ8NFJ5 357 aa21.84■■□□□ 1.09
DDR1-236ENST00000431373 ANKS1AQ92625 1134 aa21.84■■□□□ 1.09
DDR1-236ENST00000431373 ARHGAP39Q9C0H5 1083 aa21.84■■□□□ 1.09
DDR1-236ENST00000431373 EFCC1Q9HA90 598 aa21.84■■□□□ 1.09
DDR1-236ENST00000431373 TXNRD2Q9NNW7 524 aa21.84■■□□□ 1.09
DDR1-236ENST00000431373 MTMR7Q9Y216 660 aa21.84■■□□□ 1.09
DDR1-236ENST00000431373 ECM2O94769 699 aaPredicted RBP21.83■■□□□ 1.09
DDR1-236ENST00000431373 ZKSCAN1P17029 563 aaPredicted RBP21.83■■□□□ 1.09
DDR1-236ENST00000431373 SLC1A4P43007 532 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 PSMC4P43686 418 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 ERVK-9P63128 1117 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 ERVK-24P63145 666 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 CAP1Q01518 475 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 SAMD1Q6SPF0 538 aaPredicted RBP21.83■■□□□ 1.09
DDR1-236ENST00000431373 OTOP1Q7RTM1 612 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 DCAF4Q8WV16 495 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 ATG4CQ96DT6 458 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 KAT14Q9H8E8 782 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 FEM1BQ9UK73 627 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 PPP1R9AQ9ULJ8 1098 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 ISY1Q9ULR0 285 aaKnown RBP21.83■■□□□ 1.09
DDR1-236ENST00000431373 TRIM17Q9Y577 477 aa21.83■■□□□ 1.09
DDR1-236ENST00000431373 DOCK3Q8IZD9 2030 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 PEX10O60683 326 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 CNMDO75829 334 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 HSPA4P34932 840 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 FCGRTP55899 365 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 SART3Q15020 963 aaKnown RBP21.82■■□□□ 1.08
DDR1-236ENST00000431373 SEC23AQ15436 765 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 TSGA10IPQ3SY00 556 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 IFIT1BQ5T764 474 aaKnown RBP21.82■■□□□ 1.08
DDR1-236ENST00000431373 RASEFQ8IZ41 740 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 MB21D1Q8N884 522 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 CHMP4CQ96CF2 233 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 TRIM47Q96LD4 638 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 SLF1Q9BQI6 1058 aa21.82■■□□□ 1.08
DDR1-236ENST00000431373 ERICH2A1L162 156 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 IFIT3O14879 490 aaKnown RBP21.81■■□□□ 1.08
DDR1-236ENST00000431373 FMNL1O95466 1100 aaPredicted RBP21.81■■□□□ 1.08
DDR1-236ENST00000431373 GNRH1P01148 92 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 CTGFP29279 349 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 ANTXR2P58335 489 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 KRT32Q14532 448 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 CCDC96Q2M329 555 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 RASGRP2Q7LDG7 609 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 CHST3Q7LGC8 479 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 PRPF38AQ8NAV1 312 aaKnown RBP21.81■■□□□ 1.08
DDR1-236ENST00000431373 PNMA1Q8ND90 353 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 KCNB2Q92953 911 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 BTBD7Q9P203 1132 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 ADAMTS5Q9UNA0 930 aa21.81■■□□□ 1.08
DDR1-236ENST00000431373 TMEM232C9JQI7 657 aa21.8■■□□□ 1.08
DDR1-236ENST00000431373 PDHBP11177 359 aa21.8■■□□□ 1.08
DDR1-236ENST00000431373 MCM5P33992 734 aa21.8■■□□□ 1.08
DDR1-236ENST00000431373 PKN2Q16513 984 aaKnown RBP21.8■■□□□ 1.08
DDR1-236ENST00000431373 Q3C1V9 767 aa21.8■■□□□ 1.08
DDR1-236ENST00000431373 KCTD1Q719H9 257 aa21.8■■□□□ 1.08
DDR1-236ENST00000431373 FAM160B2Q86V87 743 aa21.8■■□□□ 1.08
DDR1-236ENST00000431373 CHURC1Q8WUH1 139 aa21.8■■□□□ 1.08
DDR1-236ENST00000431373 MTA3Q9BTC8 594 aa21.8■■□□□ 1.08
DDR1-236ENST00000431373 USP26Q9BXU7 913 aa21.8■■□□□ 1.08
DDR1-236ENST00000431373 VWA5AO00534 786 aa21.79■■□□□ 1.08
DDR1-236ENST00000431373 PRC1O43663 620 aa21.79■■□□□ 1.08
DDR1-236ENST00000431373 PLA2G6O60733 806 aa21.79■■□□□ 1.08
DDR1-236ENST00000431373 EIF5BO60841 1220 aaKnown RBP21.79■■□□□ 1.08
DDR1-236ENST00000431373 STAT2P52630 851 aa21.79■■□□□ 1.08
DDR1-236ENST00000431373 CCNA1P78396 465 aa21.79■■□□□ 1.08
DDR1-236ENST00000431373 IKQ13123 557 aaPredicted RBP21.79■■□□□ 1.08
DDR1-236ENST00000431373 WTAPQ15007 396 aa21.79■■□□□ 1.08
DDR1-236ENST00000431373 KIFC2Q96AC6 838 aa21.79■■□□□ 1.08
DDR1-236ENST00000431373 NEK1Q96PY6 1258 aa21.79■■□□□ 1.08
DDR1-236ENST00000431373 MCOLN1Q9GZU1 580 aa21.79■■□□□ 1.08
DDR1-236ENST00000431373 TNPO2O14787 897 aaKnown RBP21.78■■□□□ 1.08
DDR1-236ENST00000431373 SNHG28P0DPA3 235 aa21.78■■□□□ 1.08
DDR1-236ENST00000431373 HOXD10P28358 340 aa21.78■■□□□ 1.08
DDR1-236ENST00000431373 TMEM67Q5HYA8 995 aa21.78■■□□□ 1.08
DDR1-236ENST00000431373 CCAR1Q8IX12 1150 aaKnown RBP21.78■■□□□ 1.08
DDR1-236ENST00000431373 IGDCC4Q8TDY8 1250 aa21.78■■□□□ 1.08
DDR1-236ENST00000431373 SPATC1LQ9H0A9 340 aa21.78■■□□□ 1.08
DDR1-236ENST00000431373 SNX14Q9Y5W7 946 aa21.78■■□□□ 1.08
DDR1-236ENST00000431373 PLXNB2O15031 1838 aa21.78■■□□□ 1.08
DDR1-236ENST00000431373 MAPK4P31152 587 aa21.77■■□□□ 1.08
DDR1-236ENST00000431373 ZNF543Q08ER8 600 aa21.77■■□□□ 1.08
DDR1-236ENST00000431373 COL9A3Q14050 684 aaPredicted RBP21.77■■□□□ 1.08
DDR1-236ENST00000431373 ADCK5Q3MIX3 580 aa21.77■■□□□ 1.08
DDR1-236ENST00000431373 COA7Q96BR5 231 aa21.77■■□□□ 1.08
DDR1-236ENST00000431373 TMEM87BQ96K49 555 aa21.77■■□□□ 1.08
DDR1-236ENST00000431373 PORCNQ9H237 461 aa21.77■■□□□ 1.08
DDR1-236ENST00000431373 FRMPD2Q68DX3 1309 aaPredicted RBP21.77■■□□□ 1.07
DDR1-236ENST00000431373 ZBED4O75132 1171 aa21.76■■□□□ 1.07
DDR1-236ENST00000431373 FDX1P10109 184 aa21.76■■□□□ 1.07
DDR1-236ENST00000431373 PRMT2P55345 433 aa21.76■■□□□ 1.07
DDR1-236ENST00000431373 PLS1Q14651 629 aa21.76■■□□□ 1.07
DDR1-236ENST00000431373 TMEM132BQ14DG7 1078 aa21.76■■□□□ 1.07
DDR1-236ENST00000431373 FBXO46Q6PJ61 603 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms