RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 ARPP21Q9UBL0 812 aaPredicted RBP16.69■□□□□ 0.26
SEC13-211ENST00000431352 FCER1AP12319 257 aa16.68■□□□□ 0.26
SEC13-211ENST00000431352 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
SEC13-211ENST00000431352 LBHD1Q9BQE6 289 aaPredicted RBP16.68■□□□□ 0.26
SEC13-211ENST00000431352 ATP11BQ9Y2G3 1177 aa16.68■□□□□ 0.26
SEC13-211ENST00000431352 MINDY4BA8MYZ0 360 aa16.67■□□□□ 0.26
SEC13-211ENST00000431352 KBTBD13C9JR72 458 aa16.67■□□□□ 0.26
SEC13-211ENST00000431352 IGHA2P01877 340 aa16.67■□□□□ 0.26
SEC13-211ENST00000431352 PGK2P07205 417 aa16.67■□□□□ 0.26
SEC13-211ENST00000431352 RTP1P59025 263 aa16.67■□□□□ 0.26
SEC13-211ENST00000431352 DEFB123Q8N688 67 aa16.67■□□□□ 0.26
SEC13-211ENST00000431352 MAML3Q96JK9 1138 aa16.67■□□□□ 0.26
SEC13-211ENST00000431352 STRBPQ96SI9 672 aaKnown RBP16.67■□□□□ 0.26
SEC13-211ENST00000431352 MMP19Q99542 508 aa16.67■□□□□ 0.26
SEC13-211ENST00000431352 NUP88Q99567 741 aaPredicted RBP16.67■□□□□ 0.26
SEC13-211ENST00000431352 PARP14Q460N5 1801 aa16.67■□□□□ 0.26
SEC13-211ENST00000431352 COL11A1P12107 1806 aaPredicted RBP16.66■□□□□ 0.26
SEC13-211ENST00000431352 SEPT4O43236 478 aa16.66■□□□□ 0.26
SEC13-211ENST00000431352 LRIT3Q3SXY7 679 aa16.66■□□□□ 0.26
SEC13-211ENST00000431352 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
SEC13-211ENST00000431352 KBTBD3Q8NAB2 608 aa16.66■□□□□ 0.26
SEC13-211ENST00000431352 ARRDC4Q8NCT1 418 aa16.66■□□□□ 0.26
SEC13-211ENST00000431352 OSBP2Q969R2 916 aa16.66■□□□□ 0.26
SEC13-211ENST00000431352 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.66■□□□□ 0.26
SEC13-211ENST00000431352 MKNK2Q9HBH9 465 aa16.66■□□□□ 0.26
SEC13-211ENST00000431352 PRDM5Q9NQX1 630 aaPredicted RBP16.66■□□□□ 0.26
SEC13-211ENST00000431352 PRKAG2Q9UGJ0 569 aa16.66■□□□□ 0.26
SEC13-211ENST00000431352 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
SEC13-211ENST00000431352 GSG1L2A8MUP6 293 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 VWA5AO00534 786 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 SLC25A27O95847 323 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 RASA1P20936 1047 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 SLC4A3P48751 1232 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 TDO2P48775 406 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 KCTD2Q14681 263 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 FAM47AQ5JRC9 791 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 RIOX2Q8IUF8 465 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 SLC17A8Q8NDX2 589 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 APPBP2Q92624 585 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 FERMT2Q96AC1 680 aa16.65■□□□□ 0.26
SEC13-211ENST00000431352 M0R2C6 588 aa16.64■□□□□ 0.25
SEC13-211ENST00000431352 RNF113AO15541 343 aaKnown RBP16.64■□□□□ 0.25
SEC13-211ENST00000431352 GPAA1O43292 621 aa16.64■□□□□ 0.25
SEC13-211ENST00000431352 PRDM1O75626 825 aa16.64■□□□□ 0.25
SEC13-211ENST00000431352 APPP05067 770 aa16.64■□□□□ 0.25
SEC13-211ENST00000431352 STAT3P40763 770 aa16.64■□□□□ 0.25
SEC13-211ENST00000431352 ADCYAP1R1P41586 468 aa16.64■□□□□ 0.25
SEC13-211ENST00000431352 EPB41L4AQ9HCS5 686 aaPredicted RBP16.64■□□□□ 0.25
SEC13-211ENST00000431352 TRIM60Q495X7 471 aa16.63■□□□□ 0.25
SEC13-211ENST00000431352 SBK1Q52WX2 424 aa16.63■□□□□ 0.25
SEC13-211ENST00000431352 LENG1Q96BZ8 264 aaPredicted RBP16.63■□□□□ 0.25
SEC13-211ENST00000431352 SLF1Q9BQI6 1058 aa16.63■□□□□ 0.25
SEC13-211ENST00000431352 DCTPP1Q9H773 170 aa16.63■□□□□ 0.25
SEC13-211ENST00000431352 ZNF214Q9UL59 606 aaPredicted RBP16.63■□□□□ 0.25
SEC13-211ENST00000431352 ADAMTS5Q9UNA0 930 aa16.63■□□□□ 0.25
SEC13-211ENST00000431352 ROBO3Q96MS0 1386 aa16.63■□□□□ 0.25
SEC13-211ENST00000431352 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
SEC13-211ENST00000431352 NDUFB10O96000 172 aa16.62■□□□□ 0.25
SEC13-211ENST00000431352 TAL1P17542 331 aaPredicted RBP16.62■□□□□ 0.25
SEC13-211ENST00000431352 LRRC41Q15345 812 aa16.62■□□□□ 0.25
SEC13-211ENST00000431352 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
SEC13-211ENST00000431352 GPR153Q6NV75 609 aa16.62■□□□□ 0.25
SEC13-211ENST00000431352 SLC39A5Q6ZMH5 540 aa16.62■□□□□ 0.25
SEC13-211ENST00000431352 REPS2Q8NFH8 660 aa16.62■□□□□ 0.25
SEC13-211ENST00000431352 XPNPEP3Q9NQH7 507 aa16.62■□□□□ 0.25
SEC13-211ENST00000431352 ISY1Q9ULR0 285 aaKnown RBP16.62■□□□□ 0.25
SEC13-211ENST00000431352 DNAH12Q6ZR08 3092 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 F5H6K3 240 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 RARBP10826 455 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 KLRC3Q07444 240 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 ZNF792Q3KQV3 632 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 GIMAP6Q6P9H5 292 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 LRRC47Q8N1G4 583 aaKnown RBP16.61■□□□□ 0.25
SEC13-211ENST00000431352 OTUD7AQ8TE49 926 aaPredicted RBP16.61■□□□□ 0.25
SEC13-211ENST00000431352 TINF2Q9BSI4 451 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 TEX13BQ9BXU2 312 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 CLIP2Q9UDT6 1046 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 CTDP1Q9Y5B0 961 aaPredicted RBP16.61■□□□□ 0.25
SEC13-211ENST00000431352 LTBP2Q14767 1821 aa16.61■□□□□ 0.25
SEC13-211ENST00000431352 PGK1P00558 417 aa16.6■□□□□ 0.25
SEC13-211ENST00000431352 ZFYP08048 801 aaPredicted RBP16.6■□□□□ 0.25
SEC13-211ENST00000431352 COPB2P35606 906 aa16.6■□□□□ 0.25
SEC13-211ENST00000431352 CPXCR1Q8N123 301 aa16.6■□□□□ 0.25
SEC13-211ENST00000431352 KIFC2Q96AC6 838 aa16.6■□□□□ 0.25
SEC13-211ENST00000431352 CHMP4CQ96CF2 233 aa16.6■□□□□ 0.25
SEC13-211ENST00000431352 CEP95Q96GE4 821 aa16.6■□□□□ 0.25
SEC13-211ENST00000431352 SEC62Q99442 399 aaKnown RBP16.6■□□□□ 0.25
SEC13-211ENST00000431352 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
SEC13-211ENST00000431352 CNPY2Q9Y2B0 182 aa16.6■□□□□ 0.25
SEC13-211ENST00000431352 PLXNA1Q9UIW2 1896 aa16.59■□□□□ 0.25
SEC13-211ENST00000431352 GNAT2P19087 354 aa16.59■□□□□ 0.25
SEC13-211ENST00000431352 ZNF444Q8N0Y2 327 aaPredicted RBP16.59■□□□□ 0.25
SEC13-211ENST00000431352 BADQ92934 168 aa16.59■□□□□ 0.25
SEC13-211ENST00000431352 FAM161BQ96MY7 647 aa16.59■□□□□ 0.25
SEC13-211ENST00000431352 FSD1Q9BTV5 496 aa16.59■□□□□ 0.25
SEC13-211ENST00000431352 RAVER2Q9HCJ3 691 aaKnown RBP16.59■□□□□ 0.25
SEC13-211ENST00000431352 PDLIM7Q9NR12 457 aa16.59■□□□□ 0.25
SEC13-211ENST00000431352 MTMR10Q9NXD2 777 aa16.59■□□□□ 0.25
SEC13-211ENST00000431352 ZHX1Q9UKY1 873 aaPredicted RBP16.59■□□□□ 0.25
SEC13-211ENST00000431352 RIPK3Q9Y572 518 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms