RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 FXR1P51114 621 aaKnown RBP eCLIP12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 MFSD14CQ5VZR4 134 aa12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 SHCBP1Q8NEM2 672 aa12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 C11orf49Q9H6J7 331 aa12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 PITPNM1O00562 1244 aa12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 PRDM1O75626 825 aa12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 RASA1P20936 1047 aa12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 ADORA2AP29274 412 aa12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 FAM83BQ5T0W9 1011 aa12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 DPP9Q86TI2 863 aa12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 NCAPG2Q86XI2 1143 aa12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 C7orf61Q8IZ16 206 aa12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 NPLOC4Q8TAT6 608 aa12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 RBM27Q9P2N5 1060 aaKnown RBP12.13□□□□□ -0.47
HMGN1P38-201ENST00000431116 CYP2C19P33261 490 aa12.12□□□□□ -0.47
HMGN1P38-201ENST00000431116 LHX8Q68G74 356 aa12.12□□□□□ -0.47
HMGN1P38-201ENST00000431116 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
HMGN1P38-201ENST00000431116 SEC62Q99442 399 aaKnown RBP12.12□□□□□ -0.47
HMGN1P38-201ENST00000431116 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
HMGN1P38-201ENST00000431116 MROH8Q9H579 483 aa12.12□□□□□ -0.47
HMGN1P38-201ENST00000431116 FBXO28Q9NVF7 368 aa12.12□□□□□ -0.47
HMGN1P38-201ENST00000431116 PFASO15067 1338 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 SALL3Q9BXA9 1300 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 PATL2C9JE40 543 aaKnown RBP12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 STRNO43815 780 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 CYBAP13498 195 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 CNGA1P29973 690 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 TMEM132BQ14DG7 1078 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 ZMYM1Q5SVZ6 1142 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 NAPBQ9H115 298 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 ZNF287Q9HBT7 754 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 SLC5A4Q9NY91 659 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 DDX20Q9UHI6 824 aaKnown RBP12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 PPP1R9AQ9ULJ8 1098 aa12.11□□□□□ -0.47
HMGN1P38-201ENST00000431116 PLIN4Q96Q06 1357 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 VWA5AO00534 786 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 MSCO60682 206 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 COBLO75128 1261 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 NDUFB10O96000 172 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 FCER1AP12319 257 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 OLFML2BQ68BL8 750 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 TRPV1Q8NER1 839 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 SLF1Q9BQI6 1058 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 PRO3102Q9H379 93 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 PCDH10Q9P2E7 1040 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 ZMYND8Q9ULU4 1186 aaPredicted RBP12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 ADAMTS5Q9UNA0 930 aa12.1□□□□□ -0.47
HMGN1P38-201ENST00000431116 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 SLC25A27O95847 323 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 IGHA2P01877 340 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 TSPY3P0CV98 308 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 TSPY8P0CW00 308 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 COL6A1P12109 1028 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 STAT3P40763 770 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 PDE4BQ07343 736 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 PPARAQ07869 468 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 KCTD2Q14681 263 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 RIOX2Q8IUF8 465 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 ZNF444Q8N0Y2 327 aaPredicted RBP12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 ABRAQ8N0Z2 381 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 LRRC47Q8N1G4 583 aaKnown RBP12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 CEP95Q96GE4 821 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 MMP19Q99542 508 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 ZNF214Q9UL59 606 aaPredicted RBP12.09□□□□□ -0.47
HMGN1P38-201ENST00000431116 F5H6K3 240 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 PGK2P07205 417 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 SYN1P17600 705 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 COPB2P35606 906 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 PDE1AP54750 535 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 KLRC3Q07444 240 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 REPS2Q8NFH8 660 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 EVI5LQ96CN4 794 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 MAML3Q96JK9 1138 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 STAP2Q9UGK3 403 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 SMCHD1A6NHR9 2005 aa12.08□□□□□ -0.48
HMGN1P38-201ENST00000431116 MCM3APO60318 1980 aa12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 A0A1W2PPC1 479 aa12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 FOXP2O15409 715 aa12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 TTLL1O95922 423 aa12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 LRRC26Q2I0M4 334 aa12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 SNRNP48Q6IEG0 339 aaKnown RBP12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 NEDD1Q8NHV4 660 aa12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 TEX13BQ9BXU2 312 aa12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 MTMR4Q9NYA4 1195 aa12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 ISY1Q9ULR0 285 aaKnown RBP12.07□□□□□ -0.48
HMGN1P38-201ENST00000431116 DNM1LO00429 736 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms