RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 ARIH1Q9Y4X5 557 aaPredicted RBP6.96□□□□□ -1.3
LINC00309-201ENST00000431020 SLC12A7Q9Y666 1083 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 PITPNM2Q9BZ72 1349 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 FOXN1O15353 648 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 NDUFB10O96000 172 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 OTUD7BQ6GQQ9 843 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 FCHSD1Q86WN1 690 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 PHKBQ93100 1093 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 TMEM47Q9BQJ4 181 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 PLCD4Q9BRC7 762 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 MRIQ9BWK5 157 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 EFCC1Q9HA90 598 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 AS3MTQ9HBK9 375 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 PGAP2Q9UHJ9 254 aa6.96□□□□□ -1.3
LINC00309-201ENST00000431020 GOLGA8BA8MQT2 603 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 TTLL1O95922 423 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 ADD1P35611 737 aaKnown RBP6.95□□□□□ -1.3
LINC00309-201ENST00000431020 SP4Q02446 784 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 C8orf34Q49A92 452 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 C16orf86Q6ZW13 317 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 ENAHQ8N8S7 591 aaPredicted RBP6.95□□□□□ -1.3
LINC00309-201ENST00000431020 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
LINC00309-201ENST00000431020 SNX14Q9Y5W7 946 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 DICER1Q9UPY3 1922 aaKnown RBP6.95□□□□□ -1.3
LINC00309-201ENST00000431020 SPDYE5A6NIY4 337 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 PGK2P07205 417 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 CETPP11597 493 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 MCM5P33992 734 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 GTF2A2P52657 109 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 CD99L2Q8TCZ2 262 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 ZSCAN10Q96SZ4 725 aaPredicted RBP6.95□□□□□ -1.3
LINC00309-201ENST00000431020 DSCC1Q9BVC3 393 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 ASCC2Q9H1I8 757 aaPredicted RBP6.95□□□□□ -1.3
LINC00309-201ENST00000431020 EMILIN3Q9NT22 766 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 GJB4Q9NTQ9 266 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 MTMR4Q9NYA4 1195 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 CYP46A1Q9Y6A2 500 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 PRUNE2Q8WUY3 3088 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 PDS5AQ29RF7 1337 aaKnown RBP6.95□□□□□ -1.3
LINC00309-201ENST00000431020 SZT2Q5T011 3432 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 DOCK3Q8IZD9 2030 aa6.95□□□□□ -1.3
LINC00309-201ENST00000431020 PTPDC1A2A3K4 754 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 TNPO2O14787 897 aaKnown RBP6.94□□□□□ -1.3
LINC00309-201ENST00000431020 FKBP1CQ5VVH2 108 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 PPP1R13LQ8WUF5 828 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 USP26Q9BXU7 913 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 RNF186Q9NXI6 227 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 PKD2L1Q9P0L9 805 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 PPP2R3BQ9Y5P8 575 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 RAD50Q92878 1312 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 CCDC85CA6NKD9 419 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 ELNP15502 786 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 CALML3P27482 149 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 GUCY1A2P33402 732 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 LDLRAD1Q5T700 205 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 CATIPQ7Z7H3 387 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 RGS22Q8NE09 1264 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 IL27Q8NEV9 243 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 GPKOWQ92917 476 aaPredicted RBP eCLIP6.94□□□□□ -1.3
LINC00309-201ENST00000431020 KRT23Q9C075 422 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 PDRG1Q9NUG6 133 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 IVNS1ABPQ9Y6Y0 642 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 CFBP00751 764 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 PSMC4P43686 418 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 PPATQ06203 517 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 Q3C1V9 767 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 COL13A1Q5TAT6 717 aaPredicted RBP6.94□□□□□ -1.3
LINC00309-201ENST00000431020 IFNL1Q8IU54 200 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 CTCFLQ8NI51 663 aaPredicted RBP6.94□□□□□ -1.3
LINC00309-201ENST00000431020 ZNF296Q8WUU4 475 aaPredicted RBP6.94□□□□□ -1.3
LINC00309-201ENST00000431020 CCDC17Q96LX7 622 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 AGBL1Q96MI9 1066 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC00309-201ENST00000431020 PORCNQ9H237 461 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 TXNRD2Q9NNW7 524 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 SWAP70Q9UH65 585 aa6.94□□□□□ -1.3
LINC00309-201ENST00000431020 KLRF2D3W0D1 207 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 SLC10A3P09131 477 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 BMP3P12645 472 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 HOXA13P31271 388 aaPredicted RBP6.93□□□□□ -1.3
LINC00309-201ENST00000431020 GABPAQ06546 454 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 SREBF2Q12772 1141 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 NECTIN1Q15223 517 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 SNRNP48Q6IEG0 339 aaKnown RBP6.93□□□□□ -1.3
LINC00309-201ENST00000431020 HEATR3Q7Z4Q2 680 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 PLCD3Q8N3E9 789 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 SH3TC2Q8TF17 1288 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 COA7Q96BR5 231 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 PGBD1Q96JS3 809 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 GOPCQ9HD26 462 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 AFG3L2Q9Y4W6 797 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 SSC5DA1L4H1 1573 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 CDH23Q9H251 3354 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 GOLGA8AA7E2F4 631 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 PLEKHA8P1O95397 391 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 HERVK_113P62684 666 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 AKAP17AQ02040 695 aaKnown RBP6.93□□□□□ -1.3
LINC00309-201ENST00000431020 MAP2K1Q02750 393 aaPredicted RBP6.93□□□□□ -1.3
LINC00309-201ENST00000431020 NBPF11Q86T75 865 aa6.93□□□□□ -1.3
LINC00309-201ENST00000431020 DPP9Q86TI2 863 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms