RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 DDX18Q9NVP1 670 aaKnown RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 FANCLQ9NW38 375 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 LUZP4Q9P127 313 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 CUX2O14529 1486 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 ATP5OP48047 213 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 RAB27AP51159 221 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 NCBP1Q09161 790 aaKnown RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 TUBA3CQ13748 450 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 PPP1R7Q15435 360 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 OASLQ15646 514 aaKnown RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 CNGA3Q16281 694 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 ARMC4Q5T2S8 1044 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 STK32CQ86UX6 486 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 CCDC112Q8NEF3 446 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 NPLOC4Q8TAT6 608 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 SPIRE2Q8WWL2 714 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 CCT6BQ92526 530 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 RAPGEF5Q92565 580 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 PPP1R12CQ9BZL4 782 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 NEUROD4Q9HD90 331 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 C6orf222P0C671 652 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-203ENST00000430976 SLC12A2P55011 1212 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 IFRD2Q12894 506 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-203ENST00000430976 KCNB1Q14721 858 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 FAM173BQ6P4H8 233 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 ZNF467Q7Z7K2 595 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-203ENST00000430976 TRIM22Q8IYM9 498 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 CORO1BQ9BR76 489 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 TACO1Q9BSH4 297 aaKnown RBP5.95□□□□□ -1.46
PTPN4-203ENST00000430976 THUMPD2Q9BTF0 503 aaKnown RBP5.95□□□□□ -1.46
PTPN4-203ENST00000430976 CLSTN2Q9H4D0 955 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 CNGB3Q9NQW8 809 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 CROTQ9UKG9 612 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 ACAD8Q9UKU7 415 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 PCDHGA3Q9Y5H0 932 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 USP16Q9Y5T5 823 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 GOLGA8SH3BPF8 625 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 OPA1O60313 960 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 MGEA5O60502 916 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 NMT2O60551 498 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 ADCY8P40145 1251 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 DAB2P98082 770 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 PUM3Q15397 648 aaKnown RBP5.95□□□□□ -1.46
PTPN4-203ENST00000430976 TJAP1Q5JTD0 557 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 MFSD6Q6ZSS7 791 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 MIER3Q7Z3K6 550 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 ERMNQ8TAM6 284 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 FAM221BA6H8Z2 402 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 ZBED4O75132 1171 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 APOEP02649 317 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 ALDH1B1P30837 517 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 ICA1Q05084 483 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 KIF5AQ12840 1032 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 NCCRP1Q6ZVX7 275 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-203ENST00000430976 DDX42Q86XP3 938 aaKnown RBP eCLIP5.95□□□□□ -1.46
PTPN4-203ENST00000430976 USHBP1Q8N6Y0 703 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 EXOC4Q96A65 974 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 ARL8AQ96BM9 186 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 VPS50Q96JG6 964 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 EPAS1Q99814 870 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 EHMT1Q9H9B1 1298 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 TUFT1Q9NNX1 390 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 COQ3Q9NZJ6 369 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 STRIP2Q9ULQ0 834 aa5.95□□□□□ -1.46
PTPN4-203ENST00000430976 SCRIBQ14160 1630 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 FAM25EA8MYX2 175 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 CHMP2AO43633 222 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 TSPAN7P41732 249 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 MLLT3P42568 568 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 SMTNP53814 917 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 ZNF211Q13398 564 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 TCIRG1Q13488 830 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 CCBE1Q6UXH8 406 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 KCT2Q8NC54 265 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 FAM114A2Q9NRY5 505 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 NDFIP2Q9NV92 336 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 DACH1Q9UI36 760 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 R3HDM2Q9Y2K5 976 aaKnown RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 MAPK8IP3Q9UPT6 1336 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 MAP3K7O43318 606 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 GMNNO75496 209 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 RTN3O95197 1032 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 HOXA10P31260 410 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 PLA2G4EQ3MJ16 856 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 MTHFD1LQ6UB35 978 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 PTF1AQ7RTS3 328 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 SPATS2Q86XZ4 545 aaKnown RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 MTMR8Q96EF0 704 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 CRBNQ96SW2 442 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 ATP13A3Q9H7F0 1226 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 HOMER3Q9NSC5 361 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 BMP2KQ9NSY1 1161 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 DDX41Q9UJV9 622 aaKnown RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 RCAN3Q9UKA8 241 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 INPP5FQ9Y2H2 1132 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 KIF2AO00139 706 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 SURF6O75683 361 aaKnown RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 ATP5HO75947 161 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 RAPGEF3O95398 923 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 ATF7P17544 494 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms