RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 COL9A3Q14050 684 aaPredicted RBP20.61■□□□□ 0.89
CTSD-203ENST00000429746 COG2Q14746 738 aa20.61■□□□□ 0.89
CTSD-203ENST00000429746 MFSD6Q6ZSS7 791 aa20.61■□□□□ 0.89
CTSD-203ENST00000429746 STOX1Q6ZVD7 989 aa20.61■□□□□ 0.89
CTSD-203ENST00000429746 ATG4CQ96DT6 458 aa20.61■□□□□ 0.89
CTSD-203ENST00000429746 GOPCQ9HD26 462 aa20.61■□□□□ 0.89
CTSD-203ENST00000429746 GJD2Q9UKL4 321 aa20.61■□□□□ 0.89
CTSD-203ENST00000429746 FCGRTP55899 365 aa20.6■□□□□ 0.89
CTSD-203ENST00000429746 RRP12Q5JTH9 1297 aaKnown RBP20.6■□□□□ 0.89
CTSD-203ENST00000429746 GTF3C2Q8WUA4 911 aaPredicted RBP20.6■□□□□ 0.89
CTSD-203ENST00000429746 TANGO6Q9C0B7 1094 aa20.6■□□□□ 0.89
CTSD-203ENST00000429746 FMNL1O95466 1100 aaPredicted RBP20.59■□□□□ 0.89
CTSD-203ENST00000429746 IMMTQ16891 758 aaKnown RBP20.59■□□□□ 0.89
CTSD-203ENST00000429746 GPRC5AQ8NFJ5 357 aa20.59■□□□□ 0.89
CTSD-203ENST00000429746 PAGR1Q9BTK6 254 aa20.59■□□□□ 0.89
CTSD-203ENST00000429746 RNF41Q9H4P4 317 aaPredicted RBP20.59■□□□□ 0.89
CTSD-203ENST00000429746 CTNNA3Q9UI47 895 aa20.59■□□□□ 0.89
CTSD-203ENST00000429746 PPP1R9AQ9ULJ8 1098 aa20.59■□□□□ 0.89
CTSD-203ENST00000429746 ZNF236Q9UL36 1845 aa20.58■□□□□ 0.89
CTSD-203ENST00000429746 B4E1Z4 1266 aa20.58■□□□□ 0.89
CTSD-203ENST00000429746 FLOT1O75955 427 aa20.58■□□□□ 0.89
CTSD-203ENST00000429746 USP6NLQ92738 828 aa20.58■□□□□ 0.89
CTSD-203ENST00000429746 GMCL1Q96IK5 515 aa20.58■□□□□ 0.89
CTSD-203ENST00000429746 TMEM47Q9BQJ4 181 aa20.58■□□□□ 0.89
CTSD-203ENST00000429746 HOXC10Q9NYD6 342 aa20.58■□□□□ 0.89
CTSD-203ENST00000429746 STX8Q9UNK0 236 aa20.58■□□□□ 0.89
CTSD-203ENST00000429746 RBM8AQ9Y5S9 174 aaKnown RBP20.58■□□□□ 0.89
CTSD-203ENST00000429746 U3KPZ7 1027 aaPredicted RBP20.58■□□□□ 0.89
CTSD-203ENST00000429746 MKI67P46013 3256 aaKnown RBP20.58■□□□□ 0.88
CTSD-203ENST00000429746 POTEFA5A3E0 1075 aa20.57■□□□□ 0.88
CTSD-203ENST00000429746 KDM4AO75164 1064 aa20.57■□□□□ 0.88
CTSD-203ENST00000429746 CYB5R4Q7L1T6 521 aa20.57■□□□□ 0.88
CTSD-203ENST00000429746 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
CTSD-203ENST00000429746 ZNF214Q9UL59 606 aaPredicted RBP20.57■□□□□ 0.88
CTSD-203ENST00000429746 TNPO2O14787 897 aaKnown RBP20.56■□□□□ 0.88
CTSD-203ENST00000429746 CDC45O75419 566 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 FLT3LGP49771 235 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 TMEM132BQ14DG7 1078 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 NECTIN1Q15223 517 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 PRPF38BQ5VTL8 546 aaKnown RBP20.56■□□□□ 0.88
CTSD-203ENST00000429746 SLFN13Q68D06 897 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 RAET1EQ8TD07 263 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 ANKS1AQ92625 1134 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 ESR2Q92731 530 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 ZKSCAN3Q9BRR0 538 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 MOV10L1Q9BXT6 1211 aaKnown RBP20.56■□□□□ 0.88
CTSD-203ENST00000429746 TOMM22Q9NS69 142 aa20.56■□□□□ 0.88
CTSD-203ENST00000429746 SMCHD1A6NHR9 2005 aa20.55■□□□□ 0.88
CTSD-203ENST00000429746 VWA5AO00534 786 aa20.55■□□□□ 0.88
CTSD-203ENST00000429746 SNHG28P0DPA3 235 aa20.55■□□□□ 0.88
CTSD-203ENST00000429746 NT5C2P49902 561 aa20.55■□□□□ 0.88
CTSD-203ENST00000429746 IRF5Q13568 498 aa20.55■□□□□ 0.88
CTSD-203ENST00000429746 MORN1Q5T089 497 aa20.55■□□□□ 0.88
CTSD-203ENST00000429746 GPR142Q7Z601 462 aa20.55■□□□□ 0.88
CTSD-203ENST00000429746 E7EWF7 191 aa20.54■□□□□ 0.88
CTSD-203ENST00000429746 GRK4P32298 578 aa20.54■□□□□ 0.88
CTSD-203ENST00000429746 SEC23AQ15436 765 aa20.54■□□□□ 0.88
CTSD-203ENST00000429746 MB21D1Q8N884 522 aa20.54■□□□□ 0.88
CTSD-203ENST00000429746 ENAHQ8N8S7 591 aaPredicted RBP20.54■□□□□ 0.88
CTSD-203ENST00000429746 SH3TC2Q8TF17 1288 aa20.54■□□□□ 0.88
CTSD-203ENST00000429746 TTC14Q96N46 770 aa20.54■□□□□ 0.88
CTSD-203ENST00000429746 SLF1Q9BQI6 1058 aa20.54■□□□□ 0.88
CTSD-203ENST00000429746 SPATC1LQ9H0A9 340 aa20.54■□□□□ 0.88
CTSD-203ENST00000429746 ZNFX1Q9P2E3 1918 aaKnown RBP20.53■□□□□ 0.88
CTSD-203ENST00000429746 IGHA2P01877 340 aa20.53■□□□□ 0.88
CTSD-203ENST00000429746 TOP1P11387 765 aaKnown RBP20.53■□□□□ 0.88
CTSD-203ENST00000429746 BMP3P12645 472 aa20.53■□□□□ 0.88
CTSD-203ENST00000429746 CAPN2P17655 700 aa20.53■□□□□ 0.88
CTSD-203ENST00000429746 MCCP23508 829 aa20.53■□□□□ 0.88
CTSD-203ENST00000429746 MAPK4P31152 587 aa20.53■□□□□ 0.88
CTSD-203ENST00000429746 ANTXR2P58335 489 aa20.53■□□□□ 0.88
CTSD-203ENST00000429746 PPP4R3BQ5MIZ7 849 aa20.53■□□□□ 0.88
CTSD-203ENST00000429746 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
CTSD-203ENST00000429746 SLC27A2O14975 620 aa20.52■□□□□ 0.88
CTSD-203ENST00000429746 RAD21O60216 631 aa20.52■□□□□ 0.88
CTSD-203ENST00000429746 PLA2G6O60733 806 aa20.52■□□□□ 0.88
CTSD-203ENST00000429746 PDHBP11177 359 aa20.52■□□□□ 0.88
CTSD-203ENST00000429746 EN2P19622 333 aaPredicted RBP20.52■□□□□ 0.88
CTSD-203ENST00000429746 MB21D2Q8IYB1 491 aaPredicted RBP20.52■□□□□ 0.88
CTSD-203ENST00000429746 SLAIN1Q8ND83 568 aa20.52■□□□□ 0.88
CTSD-203ENST00000429746 SHCBP1Q8NEM2 672 aa20.52■□□□□ 0.88
CTSD-203ENST00000429746 ZSCAN10Q96SZ4 725 aaPredicted RBP20.52■□□□□ 0.88
CTSD-203ENST00000429746 KRT23Q9C075 422 aa20.52■□□□□ 0.88
CTSD-203ENST00000429746 UBXN2AP68543 259 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 CREB3L3Q68CJ9 461 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 KCTD1Q719H9 257 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 PLEKHH3Q7Z736 793 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 PRPF38AQ8NAV1 312 aaKnown RBP20.51■□□□□ 0.87
CTSD-203ENST00000429746 PXYLP1Q8TE99 480 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 COA7Q96BR5 231 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 CHMP4CQ96CF2 233 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 CNNM2Q9H8M5 875 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 SLC38A10Q9HBR0 1119 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 SENP2Q9HC62 589 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 ANO2Q9NQ90 1003 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 FEM1BQ9UK73 627 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 ZNF536O15090 1300 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 TNKSO95271 1327 aa20.51■□□□□ 0.87
CTSD-203ENST00000429746 TMEM232C9JQI7 657 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 ATP2A1O14983 1001 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms