RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 C12orf60Q5U649 245 aa15.76■□□□□ 0.11
HLA-F-219ENST00000429294 MMP19Q99542 508 aa15.76■□□□□ 0.11
HLA-F-219ENST00000429294 SLC4A4Q9Y6R1 1079 aa15.76■□□□□ 0.11
HLA-F-219ENST00000429294 EEF2P13639 858 aaKnown RBP15.75■□□□□ 0.11
HLA-F-219ENST00000429294 STAT3P40763 770 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 ADCYAP1R1P41586 468 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 LRRC41Q15345 812 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 PRAMEF19Q5SWL8 479 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 C16orf86Q6ZW13 317 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 RNF180Q86T96 592 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 CLEC10AQ8IUN9 316 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 SIAH1Q8IUQ4 282 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 HAUS7Q99871 368 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 ZBTB40Q9NUA8 1239 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 COG6Q9Y2V7 657 aa15.75■□□□□ 0.11
HLA-F-219ENST00000429294 TMEM132BQ14DG7 1078 aa15.74■□□□□ 0.11
HLA-F-219ENST00000429294 SNX17Q15036 470 aa15.74■□□□□ 0.11
HLA-F-219ENST00000429294 TRIM60Q495X7 471 aa15.74■□□□□ 0.11
HLA-F-219ENST00000429294 C1orf53Q5VUE5 145 aa15.74■□□□□ 0.11
HLA-F-219ENST00000429294 RIOX2Q8IUF8 465 aa15.74■□□□□ 0.11
HLA-F-219ENST00000429294 FERMT2Q96AC1 680 aa15.74■□□□□ 0.11
HLA-F-219ENST00000429294 XPNPEP3Q9NQH7 507 aa15.74■□□□□ 0.11
HLA-F-219ENST00000429294 DIS3Q9Y2L1 958 aaKnown RBP15.74■□□□□ 0.11
HLA-F-219ENST00000429294 RLFQ13129 1914 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 BAZ2AQ9UIF9 1905 aaKnown RBP15.73■□□□□ 0.11
HLA-F-219ENST00000429294 CYP2D7A0A087X1C5 515 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 FAM47AQ5JRC9 791 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 SIRT2Q8IXJ6 389 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 BADQ92934 168 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 FAM161BQ96MY7 647 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 TINF2Q9BSI4 451 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 ARPP21Q9UBL0 812 aaPredicted RBP15.73■□□□□ 0.11
HLA-F-219ENST00000429294 PPP1R9AQ9ULJ8 1098 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 ADAMTS5Q9UNA0 930 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 CNPY2Q9Y2B0 182 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 TACC3Q9Y6A5 838 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 A0A0G2JMZ2 1700 aa15.73■□□□□ 0.11
HLA-F-219ENST00000429294 ZNFX1Q9P2E3 1918 aaKnown RBP15.72■□□□□ 0.11
HLA-F-219ENST00000429294 SMCHD1A6NHR9 2005 aa15.72■□□□□ 0.11
HLA-F-219ENST00000429294 VWA5AO00534 786 aa15.72■□□□□ 0.11
HLA-F-219ENST00000429294 PGK2P07205 417 aa15.72■□□□□ 0.11
HLA-F-219ENST00000429294 SHHQ15465 462 aa15.72■□□□□ 0.11
HLA-F-219ENST00000429294 SLFNL1Q499Z3 407 aa15.72■□□□□ 0.11
HLA-F-219ENST00000429294 MIER1Q8N108 512 aa15.72■□□□□ 0.11
HLA-F-219ENST00000429294 LRRCC1Q9C099 1032 aa15.72■□□□□ 0.11
HLA-F-219ENST00000429294 FBXO28Q9NVF7 368 aa15.72■□□□□ 0.11
HLA-F-219ENST00000429294 PHF24Q9UPV7 400 aa15.72■□□□□ 0.11
HLA-F-219ENST00000429294 CTDP1Q9Y5B0 961 aaPredicted RBP15.72■□□□□ 0.11
HLA-F-219ENST00000429294 UNC80Q8N2C7 3258 aa15.71■□□□□ 0.11
HLA-F-219ENST00000429294 AKR1A1P14550 325 aa15.71■□□□□ 0.11
HLA-F-219ENST00000429294 TLE2Q04725 743 aa15.71■□□□□ 0.11
HLA-F-219ENST00000429294 FAM83BQ5T0W9 1011 aa15.71■□□□□ 0.11
HLA-F-219ENST00000429294 CTR9Q6PD62 1173 aa15.71■□□□□ 0.11
HLA-F-219ENST00000429294 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.71■□□□□ 0.11
HLA-F-219ENST00000429294 GUCD1Q96NT3 240 aa15.71■□□□□ 0.11
HLA-F-219ENST00000429294 MKNK2Q9HBH9 465 aa15.71■□□□□ 0.11
HLA-F-219ENST00000429294 PDLIM7Q9NR12 457 aa15.71■□□□□ 0.11
HLA-F-219ENST00000429294 CLTBP09497 229 aa15.7■□□□□ 0.1
HLA-F-219ENST00000429294 MSL3Q8N5Y2 521 aaKnown RBP15.7■□□□□ 0.1
HLA-F-219ENST00000429294 DDX11Q96FC9 970 aa15.7■□□□□ 0.1
HLA-F-219ENST00000429294 GPATCH3Q96I76 525 aa15.7■□□□□ 0.1
HLA-F-219ENST00000429294 SLF1Q9BQI6 1058 aa15.7■□□□□ 0.1
HLA-F-219ENST00000429294 TEX13BQ9BXU2 312 aa15.7■□□□□ 0.1
HLA-F-219ENST00000429294 PUS7LQ9H0K6 701 aaKnown RBP15.7■□□□□ 0.1
HLA-F-219ENST00000429294 ZNF287Q9HBT7 754 aa15.7■□□□□ 0.1
HLA-F-219ENST00000429294 PGK1P00558 417 aa15.69■□□□□ 0.1
HLA-F-219ENST00000429294 RAG1P15918 1043 aa15.69■□□□□ 0.1
HLA-F-219ENST00000429294 SMAD3P84022 425 aaKnown RBP15.69■□□□□ 0.1
HLA-F-219ENST00000429294 ZNF792Q3KQV3 632 aa15.69■□□□□ 0.1
HLA-F-219ENST00000429294 C9orf50Q5SZB4 431 aa15.69■□□□□ 0.1
HLA-F-219ENST00000429294 GIMAP6Q6P9H5 292 aa15.69■□□□□ 0.1
HLA-F-219ENST00000429294 PRPF38AQ8NAV1 312 aaKnown RBP15.69■□□□□ 0.1
HLA-F-219ENST00000429294 NUP133Q8WUM0 1156 aa15.69■□□□□ 0.1
HLA-F-219ENST00000429294 ZNF214Q9UL59 606 aaPredicted RBP15.69■□□□□ 0.1
HLA-F-219ENST00000429294 TRIM43BA6NCK2 446 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 MINDY4BA8MYZ0 360 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 SMIM22K7EJ46 135 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 PQBP1O60828 265 aaKnown RBP15.68■□□□□ 0.1
HLA-F-219ENST00000429294 ZBED4O75132 1171 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 SBK1Q52WX2 424 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 DIEXFQ68CQ4 756 aaKnown RBP15.68■□□□□ 0.1
HLA-F-219ENST00000429294 SNRNP48Q6IEG0 339 aaKnown RBP15.68■□□□□ 0.1
HLA-F-219ENST00000429294 SH3RF1Q7Z6J0 888 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 TRIM43Q96BQ3 446 aaPredicted RBP15.68■□□□□ 0.1
HLA-F-219ENST00000429294 STRBPQ96SI9 672 aaKnown RBP15.68■□□□□ 0.1
HLA-F-219ENST00000429294 CDX2Q99626 313 aaPredicted RBP15.68■□□□□ 0.1
HLA-F-219ENST00000429294 TSEN34Q9BSV6 310 aaKnown RBP15.68■□□□□ 0.1
HLA-F-219ENST00000429294 SEMA6BQ9H3T3 888 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 ECHDC1Q9NTX5 307 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 TMEM39AQ9NV64 488 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 NYAP2Q9P242 653 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 FAM184BQ9ULE4 1060 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 MYH7P12883 1935 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 COL11A1P12107 1806 aaPredicted RBP15.68■□□□□ 0.1
HLA-F-219ENST00000429294 LTBP2Q14767 1821 aa15.68■□□□□ 0.1
HLA-F-219ENST00000429294 ROBO3Q96MS0 1386 aa15.67■□□□□ 0.1
HLA-F-219ENST00000429294 A0A1W2PQ45 241 aaPredicted RBP15.67■□□□□ 0.1
HLA-F-219ENST00000429294 A0A1W2PQY0 241 aa15.67■□□□□ 0.1
HLA-F-219ENST00000429294 DCDC2CA8MYV0 355 aa15.67■□□□□ 0.1
HLA-F-219ENST00000429294 F5H6K3 240 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms