RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 UBE2HP62256 183 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 RILPL1Q5EBL4 403 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 NOL9Q5SY16 702 aaKnown RBP10.46□□□□□ -0.73
NR1I3-209ENST00000428574 MYSM1Q5VVJ2 828 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 MCTP2Q6DN12 878 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 BTNL9Q6UXG8 535 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 NOSTRINQ8IVI9 506 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 TRPM4Q8TD43 1214 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 LPAR1Q92633 364 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 MTMR8Q96EF0 704 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 BARHL2Q9NY43 387 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 GGA3Q9NZ52 723 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 RTEL1Q9NZ71 1219 aa10.46□□□□□ -0.73
NR1I3-209ENST00000428574 WDR90Q96KV7 1748 aa10.46□□□□□ -0.74
NR1I3-209ENST00000428574 SCN4AP35499 1836 aa10.46□□□□□ -0.74
NR1I3-209ENST00000428574 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 TRAK2O60296 914 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 DDNO94850 711 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-209ENST00000428574 EPS15P42566 896 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 SLC1A4P43007 532 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 NASPP49321 788 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-209ENST00000428574 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
NR1I3-209ENST00000428574 GNL2Q13823 731 aaKnown RBP10.45□□□□□ -0.74
NR1I3-209ENST00000428574 ANGEL2Q5VTE6 544 aaKnown RBP10.45□□□□□ -0.74
NR1I3-209ENST00000428574 USP48Q86UV5 1035 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 FERMT3Q86UX7 667 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 PNMA8AQ86V59 439 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-209ENST00000428574 SIAH1Q8IUQ4 282 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 DIS3L2Q8IYB7 885 aaKnown RBP10.45□□□□□ -0.74
NR1I3-209ENST00000428574 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
NR1I3-209ENST00000428574 STAG2Q8N3U4 1231 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 KCNG4Q8TDN1 519 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 KIAA1683Q9H0B3 1180 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 RCOR1Q9UKL0 485 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 PNMA2Q9UL42 364 aa10.45□□□□□ -0.74
NR1I3-209ENST00000428574 PNMA6FA0A0J9YX94 578 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 FAM196BA6NMK8 535 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 USP17L5A8MUK1 530 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 F5H6K3 240 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 CYTH3O43739 400 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 GDF11O95390 407 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 GNA11P29992 359 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 KRT2P35908 639 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 HIRAP54198 1017 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-209ENST00000428574 USP14P54578 494 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 KLRC3Q07444 240 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 ORC2Q13416 577 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-209ENST00000428574 SLFN13Q68D06 897 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 FAM160B2Q86V87 743 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 SULF1Q8IWU6 871 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 JMYQ8N9B5 988 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 LEO1Q8WVC0 666 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-209ENST00000428574 SYAP1Q96A49 352 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-209ENST00000428574 DCPSQ96C86 337 aaKnown RBP10.44□□□□□ -0.74
NR1I3-209ENST00000428574 SPATA32Q96LK8 384 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 WDR18Q9BV38 432 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 ZMYND12Q9H0C1 365 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 VCPKMTQ9H867 229 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 AS3MTQ9HBK9 375 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 ISY1Q9ULR0 285 aaKnown RBP10.44□□□□□ -0.74
NR1I3-209ENST00000428574 CEP131Q9UPN4 1083 aa10.44□□□□□ -0.74
NR1I3-209ENST00000428574 MYH15Q9Y2K3 1946 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 MYH4Q9Y623 1939 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 DOCK1Q14185 1865 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 ZBTB5O15062 677 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 PRPF40AO75400 957 aaKnown RBP10.43□□□□□ -0.74
NR1I3-209ENST00000428574 NDUFB10O96000 172 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 FDX1P10109 184 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 BMP3P12645 472 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 NBR1Q14596 966 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 RRP1BQ14684 758 aaKnown RBP10.43□□□□□ -0.74
NR1I3-209ENST00000428574 NPY5RQ15761 445 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-209ENST00000428574 SCYL3Q8IZE3 742 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 CHURC1Q8WUH1 139 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 FOXD4L4Q8WXT5 416 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-209ENST00000428574 AIFM3Q96NN9 605 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 MAF1Q9H063 256 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
NR1I3-209ENST00000428574 NOL7Q9UMY1 257 aaKnown RBP10.43□□□□□ -0.74
NR1I3-209ENST00000428574 PCDHA4Q9UN74 947 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 CNPY2Q9Y2B0 182 aa10.43□□□□□ -0.74
NR1I3-209ENST00000428574 DDX49Q9Y6V7 483 aaKnown RBP10.43□□□□□ -0.74
NR1I3-209ENST00000428574 STXBP3O00186 592 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 WDR46O15213 610 aaKnown RBP10.42□□□□□ -0.74
NR1I3-209ENST00000428574 FIBPO43427 364 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 PPP6R2O75170 966 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 EPHX2P34913 555 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 NF2P35240 595 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 STAT2P52630 851 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 NLRP5P59047 1200 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 GUCY1B3Q02153 619 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 CCDC96Q2M329 555 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 SLC35G1Q2M3R5 365 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 WWC2Q6AWC2 1192 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 ADGRF4Q8IZF3 695 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 BLIDQ8IZY5 108 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 CMTR1Q8N1G2 835 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms