RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
HDLBP-216ENST00000428482 IL17RBQ9NRM6 502 aa12.16□□□□□ -0.46
HDLBP-216ENST00000428482 SZT2Q5T011 3432 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 TSPY3P0CV98 308 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 TSPY8P0CW00 308 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 DSG3P32926 999 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 TFAP4Q01664 338 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 COL9A3Q14050 684 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-216ENST00000428482 MORN1Q5T089 497 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 NPLOC4Q8TAT6 608 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 LPAR1Q92633 364 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 USP6NLQ92738 828 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 SPATC1LQ9H0A9 340 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 MTMR4Q9NYA4 1195 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 ANAPC4Q9UJX5 808 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 PPP1R9AQ9ULJ8 1098 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
HDLBP-216ENST00000428482 TSPY2A6NKD2 308 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 RANBP6O60518 1105 aaKnown RBP12.14□□□□□ -0.47
HDLBP-216ENST00000428482 GNRH1P01148 92 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 PRMT2P55345 433 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 SNAP25P60880 206 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 IRF5Q13568 498 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 GRB14Q14449 540 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 PLS1Q14651 629 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 DIS3LQ8TF46 1054 aaKnown RBP12.14□□□□□ -0.47
HDLBP-216ENST00000428482 COA7Q96BR5 231 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 APBA2Q99767 749 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 ZKSCAN3Q9BRR0 538 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 TOMM22Q9NS69 142 aa12.14□□□□□ -0.47
HDLBP-216ENST00000428482 ZNF214Q9UL59 606 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-216ENST00000428482 F5H6K3 240 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 HMGCRP04035 888 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 PRKAR2AP13861 404 aaKnown RBP12.13□□□□□ -0.47
HDLBP-216ENST00000428482 ERCC3P19447 782 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 PTH1RQ03431 593 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 PDE4BQ07343 736 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 KLRC3Q07444 240 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 ALX1Q15699 326 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-216ENST00000428482 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.13□□□□□ -0.472e-10■■□□□ 13.3
HDLBP-216ENST00000428482 NYAP2Q9P242 653 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 BIN2Q9UBW5 565 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-216ENST00000428482 ISY1Q9ULR0 285 aaKnown RBP12.13□□□□□ -0.47
HDLBP-216ENST00000428482 STX8Q9UNK0 236 aa12.13□□□□□ -0.47
HDLBP-216ENST00000428482 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-216ENST00000428482 RAD50Q92878 1312 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 LTBP2Q14767 1821 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 ORC4O43929 436 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 TTLL1O95922 423 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-216ENST00000428482 CHMLP26374 656 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 HOXD10P28358 340 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 CCND3P30281 292 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-216ENST00000428482 MAPK4P31152 587 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 ARHGEF6Q15052 776 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 ZNF444Q8N0Y2 327 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-216ENST00000428482 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 LENG1Q96BZ8 264 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-216ENST00000428482 SLF1Q9BQI6 1058 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 RNF208Q9H0X6 261 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 RIPK3Q9Y572 518 aa12.12□□□□□ -0.47
HDLBP-216ENST00000428482 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
HDLBP-216ENST00000428482 B4E1Z4 1266 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 VWA5AO00534 786 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 COBLO75128 1261 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 FGRP09769 529 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 PTPREP23469 700 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 ADORA2AP29274 412 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 MAP2K5Q13163 448 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 COG2Q14746 738 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 SLFN13Q68D06 897 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 STOX1Q6ZVD7 989 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 NCAPG2Q86XI2 1143 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 TRPV1Q8NER1 839 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 DEFB118Q96PH6 123 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 NUDT12Q9BQG2 462 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 CPVLQ9H3G5 476 aa12.11□□□□□ -0.47
HDLBP-216ENST00000428482 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
HDLBP-216ENST00000428482 RAVER2Q9HCJ3 691 aaKnown RBP12.11□□□□□ -0.47
HDLBP-216ENST00000428482 PAK6Q9NQU5 681 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-216ENST00000428482 PGK2P07205 417 aa12.1□□□□□ -0.47
HDLBP-216ENST00000428482 CYP2C19P33261 490 aa12.1□□□□□ -0.47
HDLBP-216ENST00000428482 RGS2P41220 211 aa12.1□□□□□ -0.47
HDLBP-216ENST00000428482 NOVP48745 357 aa12.1□□□□□ -0.47
HDLBP-216ENST00000428482 UBXN2AP68543 259 aa12.1□□□□□ -0.47
HDLBP-216ENST00000428482 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
HDLBP-216ENST00000428482 AKNAD1Q5T1N1 836 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms