RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 CCDC148Q8NFR7 591 aa19.73■□□□□ 0.75
PRDM5-203ENST00000428209 EPSTI1Q96J88 318 aa19.73■□□□□ 0.75
PRDM5-203ENST00000428209 SERPINB13Q9UIV8 391 aa19.73■□□□□ 0.75
PRDM5-203ENST00000428209 CRKP46108 304 aa19.72■□□□□ 0.75
PRDM5-203ENST00000428209 TPM4P67936 248 aa19.72■□□□□ 0.75
PRDM5-203ENST00000428209 ATP2C1P98194 919 aaPredicted RBP19.72■□□□□ 0.75
PRDM5-203ENST00000428209 KANK3Q6NY19 840 aa19.72■□□□□ 0.75
PRDM5-203ENST00000428209 CNKSR1Q969H4 720 aa19.72■□□□□ 0.75
PRDM5-203ENST00000428209 SPZ1Q9BXG8 430 aa19.72■□□□□ 0.75
PRDM5-203ENST00000428209 CPVLQ9H3G5 476 aa19.72■□□□□ 0.75
PRDM5-203ENST00000428209 BARHL2Q9NY43 387 aa19.72■□□□□ 0.75
PRDM5-203ENST00000428209 STK32BQ9NY57 414 aa19.72■□□□□ 0.75
PRDM5-203ENST00000428209 MCM7P33993 719 aa19.71■□□□□ 0.75
PRDM5-203ENST00000428209 NOVP48745 357 aa19.71■□□□□ 0.75
PRDM5-203ENST00000428209 KIAA0825Q8IV33 1275 aa19.71■□□□□ 0.75
PRDM5-203ENST00000428209 OSBPL5Q9H0X9 879 aaPredicted RBP19.71■□□□□ 0.75
PRDM5-203ENST00000428209 SLX4Q8IY92 1834 aa19.71■□□□□ 0.75
PRDM5-203ENST00000428209 VWA3AA6NCI4 1184 aa19.71■□□□□ 0.75
PRDM5-203ENST00000428209 STRIP1Q5VSL9 837 aa19.71■□□□□ 0.75
PRDM5-203ENST00000428209 MTMR4Q9NYA4 1195 aa19.71■□□□□ 0.75
PRDM5-203ENST00000428209 RGPD3A6NKT7 1758 aaPredicted RBP19.71■□□□□ 0.75
PRDM5-203ENST00000428209 RGPD4Q7Z3J3 1758 aa19.71■□□□□ 0.75
PRDM5-203ENST00000428209 STXBP3O00186 592 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 ACTN4O43707 911 aaKnown RBP19.7■□□□□ 0.74
PRDM5-203ENST00000428209 ECE2O60344 883 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 AKR1B1P15121 316 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 GALNT17Q6IS24 598 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 RASGRP4Q8TDF6 673 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 SYMPKQ92797 1274 aaKnown RBP19.7■□□□□ 0.74
PRDM5-203ENST00000428209 CAMKK2Q96RR4 588 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 SWAP70Q9UH65 585 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 CCDC194A0A1B0GVG4 234 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 NOLC1Q14978 699 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRDM5-203ENST00000428209 NCAPHQ15003 741 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 HOMER1Q86YM7 354 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 DHX58Q96C10 678 aa19.7■□□□□ 0.74
PRDM5-203ENST00000428209 PLIN4Q96Q06 1357 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 USP17L5A8MUK1 530 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 IKBKBO14920 756 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 HLA-DOAP06340 250 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 PRR29P0C7W0 189 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 RRP36Q96EU6 259 aaKnown RBP19.69■□□□□ 0.74
PRDM5-203ENST00000428209 CCDC34Q96HJ3 373 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 ZDHHC15Q96MV8 337 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 VAT1LQ9HCJ6 419 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 ADAMTSL1Q8N6G6 1762 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 M0R2N6 131 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 RBM5P52756 815 aaKnown RBP eCLIP19.69■□□□□ 0.74
PRDM5-203ENST00000428209 NFIAQ12857 509 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 DACT2Q5SW24 774 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 GRAMD1CQ8IYS0 662 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 C17orf53Q8N3J3 647 aaPredicted RBP19.69■□□□□ 0.74
PRDM5-203ENST00000428209 DAGLBQ8NCG7 672 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 SMARCE1Q969G3 411 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 PYCARDQ9ULZ3 195 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 PCDHA6Q9UN73 950 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 PCDHA8Q9Y5H6 950 aa19.69■□□□□ 0.74
PRDM5-203ENST00000428209 A0A087X0B3 334 aa19.68■□□□□ 0.74
PRDM5-203ENST00000428209 SMARCA1P28370 1054 aa19.68■□□□□ 0.74
PRDM5-203ENST00000428209 EIF6P56537 245 aaKnown RBP19.68■□□□□ 0.74
PRDM5-203ENST00000428209 CCDC125Q86Z20 511 aa19.68■□□□□ 0.74
PRDM5-203ENST00000428209 SEC63Q9UGP8 760 aaKnown RBP19.68■□□□□ 0.74
PRDM5-203ENST00000428209 MAN1B1Q9UKM7 699 aa19.68■□□□□ 0.74
PRDM5-203ENST00000428209 NAPAP54920 295 aa19.68■□□□□ 0.74
PRDM5-203ENST00000428209 FKBP1AP62942 108 aaKnown RBP19.68■□□□□ 0.74
PRDM5-203ENST00000428209 CCDC144BQ3MJ40 725 aa19.68■□□□□ 0.74
PRDM5-203ENST00000428209 NT5DC1Q5TFE4 455 aa19.68■□□□□ 0.74
PRDM5-203ENST00000428209 FAM177A1Q8N128 213 aaPredicted RBP19.68■□□□□ 0.74
PRDM5-203ENST00000428209 LRRC47Q8N1G4 583 aaKnown RBP19.68■□□□□ 0.74
PRDM5-203ENST00000428209 KIAA1524Q8TCG1 905 aa19.68■□□□□ 0.74
PRDM5-203ENST00000428209 CCDC12Q8WUD4 166 aaPredicted RBP19.68■□□□□ 0.74
PRDM5-203ENST00000428209 MRIQ9BWK5 157 aa19.68■□□□□ 0.74
PRDM5-203ENST00000428209 PDHBP11177 359 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 BMP6P22004 513 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 SHMT1P34896 483 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 SARSP49591 514 aaKnown RBP19.67■□□□□ 0.74
PRDM5-203ENST00000428209 MYL5Q02045 173 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 AOC3Q16853 763 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 UBA5Q9GZZ9 404 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 PCDHAC2Q9Y5I4 1007 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 MYH8P13535 1937 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 IGKV6D-41A0A0C4DH26 115 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 SLFN14P0C7P3 912 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 LMOD1P29536 600 aaPredicted RBP19.67■□□□□ 0.74
PRDM5-203ENST00000428209 LRMPQ12912 555 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 SF3B2Q13435 895 aaKnown RBP19.67■□□□□ 0.74
PRDM5-203ENST00000428209 C7orf43Q8WVR3 580 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 ZMYND12Q9H0C1 365 aa19.67■□□□□ 0.74
PRDM5-203ENST00000428209 FRMPD2Q68DX3 1309 aaPredicted RBP19.66■□□□□ 0.74
PRDM5-203ENST00000428209 MYO3BQ8WXR4 1341 aa19.66■□□□□ 0.74
PRDM5-203ENST00000428209 TTLL1O95922 423 aa19.66■□□□□ 0.74
PRDM5-203ENST00000428209 CACNB3P54284 484 aa19.66■□□□□ 0.74
PRDM5-203ENST00000428209 ARL6IP4Q66PJ3 421 aaKnown RBP19.66■□□□□ 0.74
PRDM5-203ENST00000428209 CLEC10AQ8IUN9 316 aa19.66■□□□□ 0.74
PRDM5-203ENST00000428209 ZFPM1Q8IX07 1006 aa19.66■□□□□ 0.74
PRDM5-203ENST00000428209 PIGSQ96S52 555 aa19.66■□□□□ 0.74
PRDM5-203ENST00000428209 MPHOSPH10O00566 681 aaKnown RBP19.65■□□□□ 0.74
PRDM5-203ENST00000428209 SMC2O95347 1197 aa19.65■□□□□ 0.74
PRDM5-203ENST00000428209 AFMP43652 599 aa19.65■□□□□ 0.74
PRDM5-203ENST00000428209 HDLBPQ00341 1268 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms