RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 USP6NLQ92738 828 aa10.84□□□□□ -0.67
SMC1A-203ENST00000428014 GMCL1Q96IK5 515 aa10.84□□□□□ -0.67
SMC1A-203ENST00000428014 RPAP3Q9H6T3 665 aaPredicted RBP10.84□□□□□ -0.67
SMC1A-203ENST00000428014 DIAPH3Q9NSV4 1193 aa10.84□□□□□ -0.67
SMC1A-203ENST00000428014 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.84□□□□□ -0.67
SMC1A-203ENST00000428014 GJD2Q9UKL4 321 aa10.84□□□□□ -0.67
SMC1A-203ENST00000428014 DOCK3Q8IZD9 2030 aa10.84□□□□□ -0.67
SMC1A-203ENST00000428014 MINDY4BA8MYZ0 360 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 STK25O00506 426 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 SLC25A27O95847 323 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 TSPY3P0CV98 308 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 TSPY8P0CW00 308 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 PDE4AP27815 886 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 CTGFP29279 349 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 UBXN2AP68543 259 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 CAP1Q01518 475 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 NMIQ13287 307 aaPredicted RBP10.83□□□□□ -0.68
SMC1A-203ENST00000428014 RAET1EQ8TD07 263 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 RILPL2Q969X0 211 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 FAM227BQ96M60 508 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 MTA3Q9BTC8 594 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 MROH8Q9H579 483 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
SMC1A-203ENST00000428014 PTCH2Q9Y6C5 1203 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 PARP14Q460N5 1801 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 PDE4DIPQ5VU43 2346 aa10.83□□□□□ -0.68
SMC1A-203ENST00000428014 CYP2D7A0A087X1C5 515 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 SLC15A5A6NIM6 579 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 CCDC85CA6NKD9 419 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 F5H6K3 240 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 IGHA2P01877 340 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 PSEN1P49768 467 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 FLT3LGP49771 235 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 KLRC3Q07444 240 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 SHROOM1Q2M3G4 852 aaPredicted RBP10.82□□□□□ -0.68
SMC1A-203ENST00000428014 BMP2KLQ5H9B9 411 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 MORN1Q5T089 497 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 AKNAD1Q5T1N1 836 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 ZNF589Q86UQ0 364 aaPredicted RBP10.82□□□□□ -0.68
SMC1A-203ENST00000428014 DGKHQ86XP1 1220 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 PRPF38AQ8NAV1 312 aaKnown RBP10.82□□□□□ -0.68
SMC1A-203ENST00000428014 ANKS1AQ92625 1134 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 TANGO6Q9C0B7 1094 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 ARHGAP39Q9C0H5 1083 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 BCL11AQ9H165 835 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 CNNM2Q9H8M5 875 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 NRBP1Q9UHY1 535 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 PPP1R9AQ9ULJ8 1098 aa10.82□□□□□ -0.68
SMC1A-203ENST00000428014 LAMA4Q16363 1823 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 EPB41L2O43491 1005 aaKnown RBP10.81□□□□□ -0.68
SMC1A-203ENST00000428014 CNMDO75829 334 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 HMGCRP04035 888 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 CENPBP07199 599 aaPredicted RBP10.81□□□□□ -0.68
SMC1A-203ENST00000428014 GJB1P08034 283 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 GSPT1P15170 499 aaKnown RBP10.81□□□□□ -0.68
SMC1A-203ENST00000428014 RGS2P41220 211 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 PRKCZQ05513 592 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 GRB14Q14449 540 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 SLC4A8Q2Y0W8 1093 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 MAP3K21Q5TCX8 1036 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 PLEKHH3Q7Z736 793 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 FAM160B2Q86V87 743 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 ESR2Q92731 530 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 CEP95Q96GE4 821 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 TMEM106CQ9BVX2 250 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 SPATC1LQ9H0A9 340 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 TXNRD2Q9NNW7 524 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 SLC5A4Q9NY91 659 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 FEM1BQ9UK73 627 aa10.81□□□□□ -0.68
SMC1A-203ENST00000428014 DIS3Q9Y2L1 958 aaKnown RBP10.81□□□□□ -0.68
SMC1A-203ENST00000428014 MYH4Q9Y623 1939 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 TSPY2A6NKD2 308 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 ZNF213O14771 459 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 GALR2O43603 387 aaPredicted RBP10.8□□□□□ -0.68
SMC1A-203ENST00000428014 ADCY3O60266 1144 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 CHMLP26374 656 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 TFAP4Q01664 338 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 MLLT1Q03111 559 aaPredicted RBP10.8□□□□□ -0.68
SMC1A-203ENST00000428014 IMMTQ16891 758 aaKnown RBP10.8□□□□□ -0.68
SMC1A-203ENST00000428014 VPS53Q5VIR6 699 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 CWC27Q6UX04 472 aaKnown RBP10.8□□□□□ -0.68
SMC1A-203ENST00000428014 MFSD6Q6ZSS7 791 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 GPR142Q7Z601 462 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 RIOX2Q8IUF8 465 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 MSL3Q8N5Y2 521 aaKnown RBP10.8□□□□□ -0.68
SMC1A-203ENST00000428014 ANKLE1Q8NAG6 615 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 REPS2Q8NFH8 660 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 CHURC1Q8WUH1 139 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 APBA2Q99767 749 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 PAK6Q9NQU5 681 aaPredicted RBP10.8□□□□□ -0.68
SMC1A-203ENST00000428014 TRPC6Q9Y210 931 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 IVNS1ABPQ9Y6Y0 642 aa10.8□□□□□ -0.68
SMC1A-203ENST00000428014 LOC102724159A0A0B4J2E5 919 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 SMIM22K7EJ46 135 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 VWA5AO00534 786 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 SGSM2O43147 1006 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 MSCO60682 206 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 FLOT1O75955 427 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms