RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 FOXD4L3Q6VB84 417 aaPredicted RBP13.99□□□□□ -0.17
RFC4-206ENST00000427785 KCTD1Q719H9 257 aa13.99□□□□□ -0.17
RFC4-206ENST00000427785 ZC3H15Q8WU90 426 aaKnown RBP13.99□□□□□ -0.17
RFC4-206ENST00000427785 ZKSCAN4Q969J2 545 aaPredicted RBP13.99□□□□□ -0.17
RFC4-206ENST00000427785 NUP88Q99567 741 aaPredicted RBP13.99□□□□□ -0.17
RFC4-206ENST00000427785 FEZ1Q99689 392 aa13.99□□□□□ -0.17
RFC4-206ENST00000427785 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
RFC4-206ENST00000427785 RLFQ13129 1914 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 PRPF3O43395 683 aaKnown RBP13.98□□□□□ -0.17
RFC4-206ENST00000427785 CYTH3O43739 400 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 CTNND1O60716 968 aaKnown RBP13.98□□□□□ -0.17
RFC4-206ENST00000427785 RESTQ13127 1097 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 PKN1Q16512 942 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 KIAA1755Q5JYT7 1200 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 TTBK2Q6IQ55 1244 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 PNMA8AQ86V59 439 aaPredicted RBP13.98□□□□□ -0.17
RFC4-206ENST00000427785 SCYL3Q8IZE3 742 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 SPICE1Q8N0Z3 855 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 GMCL1P1Q8NEA9 526 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 DCAF4Q8WV16 495 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 WASF1Q92558 559 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 MKL1Q969V6 931 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 SPZ1Q9BXG8 430 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 UBA5Q9GZZ9 404 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 RRAGCQ9HB90 399 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 NMRK2Q9NPI5 230 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
RFC4-206ENST00000427785 ZNF112Q9UJU3 913 aa13.98□□□□□ -0.17
RFC4-206ENST00000427785 V9GY48 417 aaPredicted RBP13.98□□□□□ -0.17
RFC4-206ENST00000427785 SLC1A4P43007 532 aa13.97□□□□□ -0.17
RFC4-206ENST00000427785 MAP1SQ66K74 1059 aaPredicted RBP13.97□□□□□ -0.17
RFC4-206ENST00000427785 KRT40Q6A162 431 aa13.97□□□□□ -0.17
RFC4-206ENST00000427785 MCTP1Q6DN14 999 aa13.97□□□□□ -0.17
RFC4-206ENST00000427785 HOMER1Q86YM7 354 aa13.97□□□□□ -0.17
RFC4-206ENST00000427785 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.97□□□□□ -0.17
RFC4-206ENST00000427785 GPKOWQ92917 476 aaPredicted RBP eCLIP13.97□□□□□ -0.17
RFC4-206ENST00000427785 SHISA4Q96DD7 197 aa13.97□□□□□ -0.17
RFC4-206ENST00000427785 KLRG1Q96E93 195 aa13.97□□□□□ -0.17
RFC4-206ENST00000427785 GOPCQ9HD26 462 aa13.97□□□□□ -0.17
RFC4-206ENST00000427785 VPS54Q9P1Q0 977 aa13.97□□□□□ -0.17
RFC4-206ENST00000427785 F5H6K3 240 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
RFC4-206ENST00000427785 SCG2P13521 617 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 SLC16A2P36021 539 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 KLRC3Q07444 240 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 DGKZQ13574 1117 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 TRIM29Q14134 588 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 GPATCH4Q5T3I0 446 aaKnown RBP13.96□□□□□ -0.17
RFC4-206ENST00000427785 GBP4Q96PP9 640 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 LZTS2Q9BRK4 669 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 SH2D4AQ9H788 454 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 VCPKMTQ9H867 229 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 PICK1Q9NRD5 415 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 GINM1Q9NU53 330 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 KCNJ14Q9UNX9 436 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 TMX2Q9Y320 296 aa13.96□□□□□ -0.17
RFC4-206ENST00000427785 KIF28PB7ZC32 967 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 TRAF5O00463 557 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 USP2O75604 605 aaPredicted RBP13.95□□□□□ -0.18
RFC4-206ENST00000427785 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
RFC4-206ENST00000427785 NF2P35240 595 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 FMR1Q06787 632 aaKnown RBP eCLIP13.95□□□□□ -0.18
RFC4-206ENST00000427785 MTMR2Q13614 643 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 VGLL4Q14135 290 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 TTLL12Q14166 644 aaPredicted RBP13.95□□□□□ -0.18
RFC4-206ENST00000427785 NFKBIBQ15653 356 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 PFKFB3Q16875 520 aaPredicted RBP13.95□□□□□ -0.18
RFC4-206ENST00000427785 NOL9Q5SY16 702 aaKnown RBP13.95□□□□□ -0.18
RFC4-206ENST00000427785 FAM83BQ5T0W9 1011 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 MOB2Q70IA6 237 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 FBXO18Q8NFZ0 1043 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 GMCL1Q96IK5 515 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 PIGSQ96S52 555 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 VAT1LQ9HCJ6 419 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 RBM27Q9P2N5 1060 aaKnown RBP13.95□□□□□ -0.18
RFC4-206ENST00000427785 SNCAIPQ9Y6H5 919 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 MYH7BA7E2Y1 1941 aa13.95□□□□□ -0.18
RFC4-206ENST00000427785 A0A0G2JMZ2 1700 aa13.94□□□□□ -0.18
RFC4-206ENST00000427785 BMP3P12645 472 aa13.94□□□□□ -0.18
RFC4-206ENST00000427785 PTPRAP18433 802 aa13.94□□□□□ -0.18
RFC4-206ENST00000427785 KIF23Q02241 960 aaPredicted RBP13.94□□□□□ -0.18
RFC4-206ENST00000427785 IKQ13123 557 aaPredicted RBP13.94□□□□□ -0.18
RFC4-206ENST00000427785 WWC2Q6AWC2 1192 aa13.94□□□□□ -0.18
RFC4-206ENST00000427785 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.94□□□□□ -0.18
RFC4-206ENST00000427785 HEATR3Q7Z4Q2 680 aa13.94□□□□□ -0.18
RFC4-206ENST00000427785 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
RFC4-206ENST00000427785 RRP36Q96EU6 259 aaKnown RBP13.94□□□□□ -0.18
RFC4-206ENST00000427785 ZNF408Q9H9D4 720 aa13.94□□□□□ -0.18
RFC4-206ENST00000427785 SEC63Q9UGP8 760 aaKnown RBP13.94□□□□□ -0.18
RFC4-206ENST00000427785 USP17L10C9JJH3 530 aa13.93□□□□□ -0.18
RFC4-206ENST00000427785 TMEM232C9JQI7 657 aa13.93□□□□□ -0.18
RFC4-206ENST00000427785 PPP1R12BO60237 982 aaPredicted RBP13.93□□□□□ -0.18
RFC4-206ENST00000427785 MMP1P03956 469 aa13.93□□□□□ -0.18
RFC4-206ENST00000427785 PDIA4P13667 645 aaKnown RBP13.93□□□□□ -0.18
RFC4-206ENST00000427785 NCLP19338 710 aaKnown RBP13.93□□□□□ -0.18
RFC4-206ENST00000427785 IREB2P48200 963 aaKnown RBP13.93□□□□□ -0.18
RFC4-206ENST00000427785 LDHDQ86WU2 507 aa13.93□□□□□ -0.18
RFC4-206ENST00000427785 RIOX1Q9H6W3 641 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms