RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 NBPF3Q9H094 633 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 SPATC1LQ9H0A9 340 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 GOPCQ9HD26 462 aa22.8■■□□□ 1.24
COL9A2-204ENST00000427563 ZNFX1Q9P2E3 1918 aaKnown RBP22.8■■□□□ 1.24
COL9A2-204ENST00000427563 F5H6K3 240 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 FGRP09769 529 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 CCNA1P78396 465 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 KLRC3Q07444 240 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 MAP2K5Q13163 448 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 TMEM132BQ14DG7 1078 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 REPS2Q8NFH8 660 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 U2AF1L4Q8WU68 220 aaKnown RBP22.79■■□□□ 1.24
COL9A2-204ENST00000427563 ZNF287Q9HBT7 754 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 FLRT1Q9NZU1 646 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 LAMA4Q16363 1823 aa22.79■■□□□ 1.24
COL9A2-204ENST00000427563 SGPL1O95470 568 aa22.78■■□□□ 1.24
COL9A2-204ENST00000427563 GRB14Q14449 540 aa22.78■■□□□ 1.24
COL9A2-204ENST00000427563 WDR78Q5VTH9 848 aa22.78■■□□□ 1.24
COL9A2-204ENST00000427563 SAMD1Q6SPF0 538 aaPredicted RBP22.78■■□□□ 1.24
COL9A2-204ENST00000427563 LRRC47Q8N1G4 583 aaKnown RBP22.78■■□□□ 1.24
COL9A2-204ENST00000427563 APBA2Q99767 749 aa22.78■■□□□ 1.24
COL9A2-204ENST00000427563 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.78■■□□□ 1.24
COL9A2-204ENST00000427563 IL25Q9H293 177 aa22.78■■□□□ 1.24
COL9A2-204ENST00000427563 IL17RBQ9NRM6 502 aa22.78■■□□□ 1.24
COL9A2-204ENST00000427563 PPP1R9AQ9ULJ8 1098 aa22.78■■□□□ 1.24
COL9A2-204ENST00000427563 ZMYM6O95789 1325 aa22.78■■□□□ 1.24
COL9A2-204ENST00000427563 SLC15A5A6NIM6 579 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 RAD21O60216 631 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 NMT2O60551 498 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 TSPY3P0CV98 308 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 TSPY8P0CW00 308 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 ERCC3P19447 782 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 RGS2P41220 211 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 CCAR1Q8IX12 1150 aaKnown RBP22.77■■□□□ 1.24
COL9A2-204ENST00000427563 MB21D1Q8N884 522 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 NPLOC4Q8TAT6 608 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 DEFB118Q96PH6 123 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 CRISPLD2Q9H0B8 497 aa22.77■■□□□ 1.24
COL9A2-204ENST00000427563 VWA5AO00534 786 aa22.76■■□□□ 1.23
COL9A2-204ENST00000427563 TTLL1O95922 423 aa22.76■■□□□ 1.23
COL9A2-204ENST00000427563 IGHA2P01877 340 aa22.76■■□□□ 1.23
COL9A2-204ENST00000427563 SLC3A2P08195 630 aaKnown RBP22.76■■□□□ 1.23
COL9A2-204ENST00000427563 SHCBP1Q8NEM2 672 aa22.76■■□□□ 1.23
COL9A2-204ENST00000427563 FRMPD3Q5JV73 1810 aa22.75■■□□□ 1.23
COL9A2-204ENST00000427563 ORC4O43929 436 aa22.75■■□□□ 1.23
COL9A2-204ENST00000427563 HOXC6P09630 235 aa22.75■■□□□ 1.23
COL9A2-204ENST00000427563 NOVP48745 357 aa22.75■■□□□ 1.23
COL9A2-204ENST00000427563 HAND2P61296 217 aa22.75■■□□□ 1.23
COL9A2-204ENST00000427563 CACNB2Q08289 660 aaPredicted RBP22.75■■□□□ 1.23
COL9A2-204ENST00000427563 TTC22Q5TAA0 569 aa22.75■■□□□ 1.23
COL9A2-204ENST00000427563 CWC27Q6UX04 472 aaKnown RBP22.75■■□□□ 1.23
COL9A2-204ENST00000427563 ZNF214Q9UL59 606 aaPredicted RBP22.75■■□□□ 1.23
COL9A2-204ENST00000427563 RPTORQ8N122 1335 aa22.75■■□□□ 1.23
COL9A2-204ENST00000427563 PRKAR2AP13861 404 aaKnown RBP22.74■■□□□ 1.23
COL9A2-204ENST00000427563 ZKSCAN1P17029 563 aaPredicted RBP22.74■■□□□ 1.23
COL9A2-204ENST00000427563 PLS1Q14651 629 aa22.74■■□□□ 1.23
COL9A2-204ENST00000427563 RASGRP2Q7LDG7 609 aa22.74■■□□□ 1.23
COL9A2-204ENST00000427563 TBC1D10CQ8IV04 446 aa22.74■■□□□ 1.23
COL9A2-204ENST00000427563 GMCL1P1Q8NEA9 526 aa22.74■■□□□ 1.23
COL9A2-204ENST00000427563 SYNPO2Q9UMS6 1093 aa22.74■■□□□ 1.23
COL9A2-204ENST00000427563 ALPK3Q96L96 1907 aa22.74■■□□□ 1.23
COL9A2-204ENST00000427563 COBLO75128 1261 aa22.73■■□□□ 1.23
COL9A2-204ENST00000427563 PRPF38BQ5VTL8 546 aaKnown RBP22.73■■□□□ 1.23
COL9A2-204ENST00000427563 CWC22Q9HCG8 908 aaKnown RBP22.73■■□□□ 1.23
COL9A2-204ENST00000427563 TSPY2A6NKD2 308 aa22.72■■□□□ 1.23
COL9A2-204ENST00000427563 ADORA2AP29274 412 aa22.72■■□□□ 1.23
COL9A2-204ENST00000427563 CCND3P30281 292 aaPredicted RBP22.72■■□□□ 1.23
COL9A2-204ENST00000427563 MNX1P50219 401 aaPredicted RBP22.72■■□□□ 1.23
COL9A2-204ENST00000427563 SLFN13Q68D06 897 aa22.72■■□□□ 1.23
COL9A2-204ENST00000427563 NCAPG2Q86XI2 1143 aa22.72■■□□□ 1.23
COL9A2-204ENST00000427563 SLF1Q9BQI6 1058 aa22.72■■□□□ 1.23
COL9A2-204ENST00000427563 HMX1Q9NP08 348 aaPredicted RBP22.72■■□□□ 1.23
COL9A2-204ENST00000427563 DIAPH3Q9NSV4 1193 aa22.72■■□□□ 1.23
COL9A2-204ENST00000427563 PLXNA1Q9UIW2 1896 aa22.72■■□□□ 1.23
COL9A2-204ENST00000427563 RANBP6O60518 1105 aaKnown RBP22.71■■□□□ 1.23
COL9A2-204ENST00000427563 RIOX2Q8IUF8 465 aa22.71■■□□□ 1.23
COL9A2-204ENST00000427563 TRMT44Q8IYL2 757 aaKnown RBP22.71■■□□□ 1.23
COL9A2-204ENST00000427563 CHMP4CQ96CF2 233 aa22.71■■□□□ 1.23
COL9A2-204ENST00000427563 IVNS1ABPQ9Y6Y0 642 aa22.71■■□□□ 1.23
COL9A2-204ENST00000427563 STRNO43815 780 aa22.7■■□□□ 1.22
COL9A2-204ENST00000427563 FARP2O94887 1054 aaPredicted RBP22.7■■□□□ 1.22
COL9A2-204ENST00000427563 TFRCP02786 760 aaKnown RBP22.7■■□□□ 1.22
COL9A2-204ENST00000427563 STAT3P40763 770 aa22.7■■□□□ 1.22
COL9A2-204ENST00000427563 TRPV1Q8NER1 839 aa22.7■■□□□ 1.22
COL9A2-204ENST00000427563 DIS3LQ8TF46 1054 aaKnown RBP22.7■■□□□ 1.22
COL9A2-204ENST00000427563 MROH8Q9H579 483 aa22.7■■□□□ 1.22
COL9A2-204ENST00000427563 RIPK3Q9Y572 518 aa22.7■■□□□ 1.22
COL9A2-204ENST00000427563 NEDD4P46934 1319 aa22.69■■□□□ 1.22
COL9A2-204ENST00000427563 RRP12Q5JTH9 1297 aaKnown RBP22.69■■□□□ 1.22
COL9A2-204ENST00000427563 AKNAD1Q5T1N1 836 aa22.69■■□□□ 1.22
COL9A2-204ENST00000427563 STAG1Q8WVM7 1258 aa22.69■■□□□ 1.22
COL9A2-204ENST00000427563 STX8Q9UNK0 236 aa22.69■■□□□ 1.22
COL9A2-204ENST00000427563 HIP1O00291 1037 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 SLC34A2O95436 690 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 SLC25A27O95847 323 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 BMP3P12645 472 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 CYP2C19P33261 490 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 LHX8Q68G74 356 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 ABRAQ8N0Z2 381 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 PRPF38AQ8NAV1 312 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms