RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 RASGRP2Q7LDG7 609 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 HEATR3Q7Z4Q2 680 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 GRAMD1CQ8IYS0 662 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 CCDC148Q8NFR7 591 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 SYMPKQ92797 1274 aaKnown RBP15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 DHX58Q96C10 678 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 MAN1B1Q9UKM7 699 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 VWA3AA6NCI4 1184 aa15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 KLRF2D3W0D1 207 aa15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 SMC2O95347 1197 aa15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 PARP1P09874 1014 aaKnown RBP15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 MCM7P33993 719 aa15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 TYW1BQ6NUM6 668 aa15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 SMARCE1Q969G3 411 aa15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 DDX4Q9NQI0 724 aaKnown RBP15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 USP40Q9NVE5 1235 aa15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 RGPD3A6NKT7 1758 aaPredicted RBP15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 RGPD4Q7Z3J3 1758 aa15.97■□□□□ 0.15
APOBEC3D-202ENST00000427494 A0A087X0B3 334 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 STXBP3O00186 592 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 MYL5Q02045 173 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 CACTINQ8WUQ7 758 aaKnown RBP15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 SPZ1Q9BXG8 430 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 BARHL2Q9NY43 387 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 IFNKQ9P0W0 207 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 PLIN4Q96Q06 1357 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 LMOD1P29536 600 aaPredicted RBP15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 NT5DC1Q5TFE4 455 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 USP17L2Q6R6M4 530 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 FILIP1Q7Z7B0 1213 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 RASGRP4Q8TDF6 673 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 CCDC34Q96HJ3 373 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 XPO4Q9C0E2 1151 aaKnown RBP15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 CPVLQ9H3G5 476 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 DBNDD1Q9H9R9 158 aa15.96■□□□□ 0.15
APOBEC3D-202ENST00000427494 CCDC194A0A1B0GVG4 234 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 BMP6P22004 513 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 SARSP49591 514 aaKnown RBP15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 GABPAQ06546 454 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 DAGLBQ8NCG7 672 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 TEKT1Q969V4 418 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 H0YIN7 160 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 M0R2N6 131 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 TERF1P54274 439 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 GALNT17Q6IS24 598 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 HHIPL2Q6UWX4 724 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 PCDHA6Q9UN73 950 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 PCDHA8Q9Y5H6 950 aa15.95■□□□□ 0.14
APOBEC3D-202ENST00000427494 SLX4Q8IY92 1834 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 TPM2P07951 284 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 SLFN14P0C7P3 912 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 AKR1B1P15121 316 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 AFMP43652 599 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 NOVP48745 357 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 FANCCQ00597 558 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 MORC3Q14149 939 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 STYK1Q6J9G0 422 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 CDC42EP5Q6NZY7 148 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 PODNQ7Z5L7 613 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 LRRC8AQ8IWT6 810 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 TRIML1Q8N9V2 468 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 RRP36Q96EU6 259 aaKnown RBP15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 OSBPL5Q9H0X9 879 aaPredicted RBP15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 HSD3B7Q9H2F3 369 aa15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
APOBEC3D-202ENST00000427494 USP17L5A8MUK1 530 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 NEMFO60524 1076 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 ATP1A3P13637 1013 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 NAPAP54920 295 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 ARID5BQ14865 1188 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 HOMER1Q86YM7 354 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 PAGE5Q96GU1 130 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 KCNQ5Q9NR82 932 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 MTMR4Q9NYA4 1195 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 SEC63Q9UGP8 760 aaKnown RBP15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 DACH1Q9UI36 760 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 CRKP46108 304 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 IL17AQ16552 155 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 APOBEC3HQ6NTF7 200 aaKnown RBP15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 TMC6Q7Z403 805 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 FAM177A1Q8N128 213 aaPredicted RBP15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 MLKLQ8NB16 471 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 CCDC12Q8WUD4 166 aaPredicted RBP15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 IMPACTQ9P2X3 320 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 SWAP70Q9UH65 585 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 SERPINB13Q9UIV8 391 aa15.93■□□□□ 0.14
APOBEC3D-202ENST00000427494 FRMPD2Q68DX3 1309 aaPredicted RBP15.92■□□□□ 0.14
APOBEC3D-202ENST00000427494 HLA-DOAP06340 250 aa15.92■□□□□ 0.14
APOBEC3D-202ENST00000427494 GSDMDP57764 484 aa15.92■□□□□ 0.14
APOBEC3D-202ENST00000427494 ARL6IP4Q66PJ3 421 aaKnown RBP15.92■□□□□ 0.14
APOBEC3D-202ENST00000427494 LRRC47Q8N1G4 583 aaKnown RBP15.92■□□□□ 0.14
APOBEC3D-202ENST00000427494 C4orf32Q8N8J7 132 aa15.92■□□□□ 0.14
APOBEC3D-202ENST00000427494 SPATA20Q8TB22 786 aa15.92■□□□□ 0.14
APOBEC3D-202ENST00000427494 VAT1LQ9HCJ6 419 aa15.92■□□□□ 0.14
APOBEC3D-202ENST00000427494 IGKV6D-41A0A0C4DH26 115 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 MYO1BO43795 1136 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 ECE2O60344 883 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 SERPINC1P01008 464 aa15.91■□□□□ 0.14
APOBEC3D-202ENST00000427494 PDHBP11177 359 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms