RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 DPP9Q86TI2 863 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 ABRAQ8N0Z2 381 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 ATG4CQ96DT6 458 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 PAWRQ96IZ0 340 aaKnown RBP12.11□□□□□ -0.47
COMMD1-202ENST00000427417 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 TRIOBPQ9H2D6 2365 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 TRIM6-TRIM34B2RNG4 842 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 F5H6K3 240 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 PRDM1O75626 825 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 TTLL1O95922 423 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 ERCC3P19447 782 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 CCND3P30281 292 aaPredicted RBP12.1□□□□□ -0.47
COMMD1-202ENST00000427417 COPB2P35606 906 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 KLRC3Q07444 240 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 PPARAQ07869 468 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 B4GALNT3Q6L9W6 998 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 CHD1LQ86WJ1 897 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 NCAPG2Q86XI2 1143 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 FLRT1Q9NZU1 646 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 CLIP2Q9UDT6 1046 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 OGDHLQ9ULD0 1010 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 PPP1R9AQ9ULJ8 1098 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 ADAMTS5Q9UNA0 930 aa12.1□□□□□ -0.47
COMMD1-202ENST00000427417 PARP14Q460N5 1801 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 A0A0G2JMZ2 1700 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 PLIN4Q96Q06 1357 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 MSCO60682 206 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 FCER1AP12319 257 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 ADORA2AP29274 412 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
COMMD1-202ENST00000427417 TMEM132BQ14DG7 1078 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 NEDD1Q8NHV4 660 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 EXOC6Q8TAG9 804 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 NPLOC4Q8TAT6 608 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 MKL1Q969V6 931 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 CEP95Q96GE4 821 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 NBPF3Q9H094 633 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 MTMR4Q9NYA4 1195 aa12.09□□□□□ -0.47
COMMD1-202ENST00000427417 GREB1LQ9C091 1923 aaPredicted RBP12.09□□□□□ -0.47
COMMD1-202ENST00000427417 VWA5AO00534 786 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 EVI5O60447 810 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 NDUFB10O96000 172 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
COMMD1-202ENST00000427417 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
COMMD1-202ENST00000427417 TFAP4Q01664 338 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 NUCB1Q02818 461 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 OLFML2BQ68BL8 750 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 CCDC129Q6ZRS4 1044 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 RIOX2Q8IUF8 465 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 PRPF38AQ8NAV1 312 aaKnown RBP12.08□□□□□ -0.48
COMMD1-202ENST00000427417 GMCL1P1Q8NEA9 526 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 RILPL2Q969X0 211 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 OSBPL3Q9H4L5 887 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 C11orf49Q9H6J7 331 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 FBXO28Q9NVF7 368 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 ANAPC4Q9UJX5 808 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 CTDP1Q9Y5B0 961 aaPredicted RBP12.08□□□□□ -0.48
COMMD1-202ENST00000427417 COL11A1P12107 1806 aaPredicted RBP12.08□□□□□ -0.48
COMMD1-202ENST00000427417 ZNF236Q9UL36 1845 aa12.08□□□□□ -0.48
COMMD1-202ENST00000427417 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 TSPY2A6NKD2 308 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 ZBED4O75132 1171 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 IGHDP01880 384 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 CNGA1P29973 690 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 STAT3P40763 770 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 KCTD2Q14681 263 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 ALX1Q15699 326 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 MMP19Q99542 508 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
COMMD1-202ENST00000427417 FEM1BQ9UK73 627 aa12.07□□□□□ -0.48
COMMD1-202ENST00000427417 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
COMMD1-202ENST00000427417 A0A0D9SFI3 127 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 HIP1O00291 1037 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 FDX1P10109 184 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 BMP3P12645 472 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 CYP2C19P33261 490 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 SLFN13Q68D06 897 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 LHX8Q68G74 356 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 PLEKHM2Q8IWE5 1019 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 LRRC47Q8N1G4 583 aaKnown RBP12.06□□□□□ -0.48
COMMD1-202ENST00000427417 FAM227BQ96M60 508 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 NUP88Q99567 741 aaPredicted RBP12.06□□□□□ -0.48
COMMD1-202ENST00000427417 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 DDX20Q9UHI6 824 aaKnown RBP12.06□□□□□ -0.48
COMMD1-202ENST00000427417 ZNF214Q9UL59 606 aaPredicted RBP12.06□□□□□ -0.48
COMMD1-202ENST00000427417 PFASO15067 1338 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 ZMYM6O95789 1325 aa12.06□□□□□ -0.48
COMMD1-202ENST00000427417 ATP2A1O14983 1001 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 FOXP2O15409 715 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 ORC4O43929 436 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 RANBP6O60518 1105 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms